myRT

myRT report for GCA_000567725.1_Kleb_pneu_MGH_39_V1

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Seq: KK036960.1 Klebsiella pneumoniae MGH 39 genomic scaffold adjbr-supercont1.1, whole genome shotgun sequence (3623712 bp)
Overview 1 RT 1: 329070-334230 bp 2 RT 2: 1869152-1873866 bp Neighborhood of RT #1 [329070, 335036] Peptidase_M78 IncA RVT-UG5 PRK04247 Neighborhood of RT #2 [1869152, 1873866] umuC RVT-Retrons Feature: gene Location: 329070-329618 bp Ori: EWF78843.1 Feature: domain Description: Peptidase_M78 Location: 329223-329586 bp Feature: domain Description: Peptidase_M78 Location: 329223-329586 bp Feature: gene Location: 329618-330292 bp Ori: EWF78844.1 Feature: domain Description: IncA Location: 329909-330251 bp Feature: domain Description: IncA Location: 329909-330251 bp Feature: gene Location: 330740-333400 bp Ori: EWF78845.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 330881-331376 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 330881 -331 376 bp Feature: gene Location: 333400-333756 bp Feature: gene Location: 333936-335036 bp Ori: EWF78847.1 Feature: domain Description: PRK04247 Location: 333999-334230 bp Feature: domain Description: PRK04247 Location: 333999-334230 bp Feature: gene Location: 1869152-1869586 bp Feature: gene Location: 1869559-1870236 bp Ori: EWF74579.1 Feature: domain Description: umuC Location: 1869562-1870234 bp Feature: domain Description: umuC Location: 1 869562-1 870234 bp Feature: gene Location: 1870633-1871853 bp Ori: EWF74580.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1870816-1871395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 87081 6-1 871 395 bp Feature: gene Location: 1871850-1872551 bp Feature: gene Location: 1872718-1873866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), IncA, RVT-UG5, PRK04247 (endonuclease NucS), umuC (PRK03609), RVT-Retrons

Seq: KK036962.1 Klebsiella pneumoniae MGH 39 genomic scaffold adjbr-supercont1.3, whole genome shotgun sequence (229507 bp)
Overview 1 RT 1: 44141-48935 bp Neighborhood of RT #1 [44141, 48937] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 44141-45190 bp Ori: EWF65462.1 Feature: domain Description: umuC Location: 44144-45140 bp Feature: domain Description: umuC Location: 44144-45140 bp Feature: gene Location: 45190-45615 bp Ori: EWF65463.1 Feature: domain Description: PRK10276 Location: 45193-45601 bp Feature: domain Description: PRK102 76 Location: 45193-45601 bp Feature: gene Location: 46095-47528 bp Ori: EWF65464.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46422-47136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4642 2 -47136 bp Feature: gene Location: 47762-47992 bp Feature: gene Location: 48512-48937 bp Ori: EWF65466.1 Feature: domain Description: Antirestrict Location: 48647-48935 bp Feature: domain Description: Antirestrict Location: 48647-48935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)