myRT

myRT report for GCA_000567765.2_ASM56776v2

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Seq: JCNX02000001.1 Klebsiella pneumoniae MGH 31 scaffold00001, whole genome shotgun sequence (4846078 bp)
Overview 1 RT 1: 584456-587863 bp 2 RT 2: 1025803-1029972 bp 3 RT 3: 1361878-1367296 bp 4 RT 4: 1545404-1553179 bp 5 RT 5: 2787324-2793807 bp 6 RT 6: 3360133-3365794 bp Neighborhood of RT #1 [584456, 587964] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025803, 1029977] YbjK int RVT-GII DinI Neighborhood of RT #3 [1361878, 1367298] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1545404, 1553181] Rve PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [2787324, 2793809] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [3360133, 3365871] DinI RVT-GII Phage_GPA dam Feature: gene Location: 584456-585187 bp Feature: domain Description: Laminin_G_3 Location: 584777-585131 bp Feature: domain Description: Laminin_G_3 Location: 584777-5851 31 bp Feature: gene Location: 585184-585393 bp Feature: gene Location: 585843-587330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586248-586938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586248-586938 bp Feature: gene Location: 587408-587647 bp Feature: gene Location: 587647-587964 bp Feature: domain Description: PRK10276 Location: 587653-587767 bp Feature: domain Description: PRK1 0276 Location: 587653-587767 bp Feature: domain Description: PRK10276 Location: 587794-587863 bp Feature: domain Description: PRK1 0276 Location: 587794-587863 bp Feature: gene Location: 1025803-1026366 bp Feature: domain Description: YbjK Location: 1025809-1026346 bp Feature: domain Description: YbjK Location: 1 025809-1 026346 bp Feature: gene Location: 1026489-1027541 bp Feature: domain Description: int Location: 1026492-1027491 bp Feature: domain Description: int Location: 1 026492-1 027491 bp Feature: gene Location: 1027957-1029444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028362-1029052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028362-1 029052 bp Feature: gene Location: 1029545-1029733 bp Feature: gene Location: 1029744-1029977 bp Feature: domain Description: DinI Location: 1029786-1029972 bp Feature: domain Description: DinI Location: 1 029786-1 029972 bp Feature: gene Location: 1361878-1363017 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1362061-1362961 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 362061 -1 362961 bp Feature: gene Location: 1363188-1363430 bp Feature: domain Description: DinI Location: 1363239-1363419 bp Feature: domain Description: DinI Location: 1 363239-1 36341 9 bp Feature: gene Location: 1364045-1365532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1364450-1365140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 364450-1 3651 40 bp Feature: gene Location: 1365611-1366030 bp Feature: domain Description: PRK10276 Location: 1365614-1366025 bp Feature: domain Description: PRK1 0276 Location: 1 36561 4-1 366025 bp Feature: gene Location: 1366033-1367298 bp Feature: domain Description: umuC Location: 1366036-1367296 bp Feature: domain Description: umuC Location: 1 366036-1 367296 bp Feature: gene Location: 1545404-1546108 bp Feature: domain Description: Rve Location: 1545407-1546052 bp Feature: domain Description: Rve Location: 1 545407-1 546052 bp Feature: gene Location: 1546174-1546623 bp Feature: domain Description: PinE Location: 1546183-1546615 bp Feature: domain Description: PinE Location: 1 5461 83-1 54661 5 bp Feature: gene Location: 1548018-1549505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1548423-1549113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 548423-1 5491 1 3 bp Feature: gene Location: 1549928-1551415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550333-1551023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 550333-1 551 023 bp Feature: gene Location: 1551408-1551914 bp Feature: domain Description: PRK10276 Location: 1551498-1551909 bp Feature: domain Description: PRK1 0276 Location: 1 551 498-1 551 909 bp Feature: gene Location: 1551916-1553181 bp Feature: domain Description: umuC Location: 1551919-1553179 bp Feature: domain Description: umuC Location: 1 551 91 9-1 5531 79 bp Feature: gene Location: 2787324-2788382 bp Feature: domain Description: YccC Location: 2787330-2788368 bp Feature: domain Description: YccC Location: 2787330-2788368 bp Feature: gene Location: 2788481-2788954 bp Feature: domain Description: PRK10016 Location: 2788484-2788943 bp Feature: domain Description: PRK1 001 6 Location: 2788484-2788943 bp Feature: gene Location: 2789036-2790523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2789441-2790131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2789441 -27901 31 bp Feature: gene Location: 2791041-2792204 bp Feature: domain Description: dacD Location: 2791044-2792199 bp Feature: domain Description: dacD Location: 2791 044-27921 99 bp Feature: gene Location: 2792385-2793809 bp Feature: domain Description: SbcB Location: 2792391-2793807 bp Feature: domain Description: SbcB Location: 2792391 -2793807 bp Feature: gene Location: 3360133-3360366 bp Feature: domain Description: DinI Location: 3360178-3360361 bp Feature: domain Description: DinI Location: 33601 78-3360361 bp Feature: gene Location: 3360378-3360566 bp Feature: gene Location: 3360674-3362161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3361079-3361769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3361 079-3361 769 bp Feature: gene Location: 3362639-3365023 bp Feature: domain Description: Phage_GPA Location: 3363203-3364169 bp Feature: domain Description: Phage_GPA Location: 3363203-33641 69 bp Feature: gene Location: 3365020-3365871 bp Feature: domain Description: dam Location: 3365023-3365794 bp Feature: domain Description: dam Location: 3365023-3365794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Phage_GPA (pfam05840), dam (TIGR00571)

Seq: JCNX02000006.1 Klebsiella pneumoniae MGH 31 scaffold00006, whole genome shotgun sequence (30898 bp)
Overview 1 RT 1: 6313-10755 bp Neighborhood of RT #1 [6313, 10757] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 6313-7584 bp Feature: domain Description: umuC Location: 6316-7576 bp Feature: domain Description: umuC Location: 6316-7576 bp Feature: gene Location: 7584-8015 bp Feature: domain Description: PRK10276 Location: 7635-7998 bp Feature: domain Description: PRK102 76 Location: 7635-7998 bp Feature: gene Location: 8421-9908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8826-9516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882 6-9516 bp Feature: gene Location: 10060-10335 bp Feature: domain Description: InsA Location: 10066-10327 bp Feature: domain Description: InsA Location: 10066-1032 7 bp Feature: gene Location: 10380-10757 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10383-10755 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10383-10755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JCNX02000003.1 Klebsiella pneumoniae MGH 31 scaffold00003, whole genome shotgun sequence (174674 bp)
Overview 1 RT 1: 26373-31898 bp 2 RT 2: 47758-52752 bp 3 RT 3: 153017-158369 bp Neighborhood of RT #1 [26373, 32065] DDE_Tnp_IS1 BetT RVT-GII PRK09928 DUF2254 Neighborhood of RT #2 [47758, 52754] umuC PRK10276 RVT-GII Antirestrict Neighborhood of RT #3 [153017, 158506] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 26373-26666 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26376-26664 bp Feature: domain Description: DDE_Tnp_IS1 Location: 263 76-26664 bp Feature: gene Location: 26818-28296 bp Feature: domain Description: BetT Location: 26848-28288 bp Feature: domain Description: BetT Location: 26848-28288 bp Feature: gene Location: 28345-29832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28750-29440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28750-29440 bp Feature: gene Location: 30228-30725 bp Feature: domain Description: PRK09928 Location: 30249-30723 bp Feature: domain Description: PRK09928 Location: 3 0249-3 0723 bp Feature: gene Location: 30788-32065 bp Feature: domain Description: DUF2254 Location: 30830-31898 bp Feature: domain Description: DUF2254 Location: 3 083 0-3 1898 bp Feature: gene Location: 47758-49029 bp Feature: domain Description: umuC Location: 47761-49024 bp Feature: domain Description: umuC Location: 47761-49024 bp Feature: gene Location: 49029-49454 bp Feature: domain Description: PRK10276 Location: 49032-49440 bp Feature: domain Description: PRK10276 Location: 4903 2-49440 bp Feature: gene Location: 49857-51344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50262-50952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50262-50952 bp Feature: gene Location: 51578-51808 bp Feature: gene Location: 52329-52754 bp Feature: domain Description: Antirestrict Location: 52464-52752 bp Feature: domain Description: Antirestrict Location: 52464-52752 bp Feature: gene Location: 153017-154288 bp Feature: domain Description: umuC Location: 153020-154280 bp Feature: domain Description: umuC Location: 153 020-154280 bp Feature: gene Location: 154288-154719 bp Feature: domain Description: PRK10276 Location: 154336-154702 bp Feature: domain Description: PRK10276 Location: 1543 3 6-154702 bp Feature: gene Location: 155203-156612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155530-156220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15553 0-156220 bp Feature: gene Location: 156861-157832 bp Feature: domain Description: StbA Location: 156864-157809 bp Feature: domain Description: StbA Location: 156864-157809 bp Feature: gene Location: 157835-158506 bp Feature: domain Description: Plasmid_stab_B Location: 157850-158057 bp Feature: domain Description: Plasmid_stab_B Location: 157850-158057 bp Feature: domain Description: Plasmid_stab_B Location: 158162-158369 bp Feature: domain Description: Plasmid_stab_B Location: 158162-1583 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, PRK09928 (choline transport protein BetT; Provisional), DUF2254 (pfam10011), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Antirestrict (pfam03230), StbA (pfam06406), Plasmid_stab_B (pfam10784)