myRT

myRT report for GCA_000567785.1_Kleb_pneu_MGH_29_V1

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Seq: KK036982.1 Klebsiella pneumoniae MGH 29 genomic scaffold adjbF-supercont1.6, whole genome shotgun sequence (201557 bp)
Overview 1 RT 1: 79778-84771 bp 2 RT 2: 103810-108212 bp 3 RT 3: 197904-201107 bp Neighborhood of RT #1 [79778, 84776] Antirestrict RVT-GII PRK10276 umuC Neighborhood of RT #2 [103810, 108214] PRK09928 RVT-GII BetT DDE_Tnp_IS1 Neighborhood of RT #3 [197904, 201499] umuC PRK10276 RVT-GII Feature: gene Location: 79778-80203 bp Feature: domain Description: Antirestrict Location: 79913-80201 bp Feature: domain Description: Antirestrict Location: 7991 3-80201 bp Feature: gene Location: 80724-80954 bp Feature: gene Location: 81188-82675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81593-82283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 593-82283 bp Feature: gene Location: 83080-83505 bp Feature: domain Description: PRK10276 Location: 83083-83491 bp Feature: domain Description: PRK1 0276 Location: 83083-83491 bp Feature: gene Location: 83505-84776 bp Feature: domain Description: umuC Location: 83508-84771 bp Feature: domain Description: umuC Location: 83508-84771 bp Feature: gene Location: 103810-103917 bp Feature: gene Location: 103862-104359 bp Feature: domain Description: PRK09928 Location: 103883-104357 bp Feature: domain Description: PRK09928 Location: 1 03883-1 04357 bp Feature: gene Location: 104755-106242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105160-105850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 051 60-1 05850 bp Feature: gene Location: 106291-107769 bp Feature: domain Description: BetT Location: 106321-107761 bp Feature: domain Description: BetT Location: 1 06321 -1 07761 bp Feature: gene Location: 107921-108214 bp Feature: domain Description: DDE_Tnp_IS1 Location: 107924-108212 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1 07924-1 0821 2 bp Feature: gene Location: 197904-199175 bp Feature: domain Description: umuC Location: 197907-199167 bp Feature: domain Description: umuC Location: 1 97907-1 991 67 bp Feature: gene Location: 199175-199606 bp Feature: domain Description: PRK10276 Location: 199226-199589 bp Feature: domain Description: PRK1 0276 Location: 1 99226-1 99589 bp Feature: gene Location: 200012-201499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200417-201107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20041 7-201 1 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PRK09928 (choline transport protein BetT; Provisional), BetT (COG1292), DDE_Tnp_IS1 (pfam03400)

Seq: KK036975.1 Klebsiella pneumoniae MGH 29 genomic scaffold adjbF-supercont1.1, whole genome shotgun sequence (3103125 bp)
Overview 1 RT 1: 325470-329787 bp 2 RT 2: 768918-774523 bp 3 RT 3: 1155675-1161093 bp 4 RT 4: 1343407-1348690 bp 5 RT 5: 2589476-2595959 bp Neighborhood of RT #1 [325470, 329888] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [768918, 774549] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1155675, 1161095] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1343407, 1348692] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2589476, 2595961] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 325470-326201 bp Feature: domain Description: Laminin_G_3 Location: 325791-326145 bp Feature: domain Description: Laminin_G_3 Location: 32 5791-32 6145 bp Feature: gene Location: 326198-326357 bp Feature: gene Location: 327767-329254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 328172-328862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 8172 -32 8862 bp Feature: gene Location: 329332-329571 bp Feature: gene Location: 329571-329888 bp Feature: domain Description: PRK10276 Location: 329577-329691 bp Feature: domain Description: PRK102 76 Location: 32 9577-32 9691 bp Feature: domain Description: PRK10276 Location: 329718-329787 bp Feature: domain Description: PRK102 76 Location: 32 9718-32 9787 bp Feature: gene Location: 768918-769481 bp Feature: domain Description: YbjK Location: 768924-769461 bp Feature: domain Description: YbjK Location: 76892 4-769461 bp Feature: gene Location: 769604-770656 bp Feature: domain Description: int Location: 769607-770606 bp Feature: domain Description: int Location: 769607-770606 bp Feature: gene Location: 771072-772559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771477-772167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 771477-772 167 bp Feature: gene Location: 772658-773602 bp Feature: gene Location: 773614-774549 bp Feature: domain Description: Phage_CI_repr Location: 773698-773881 bp Feature: domain Description: Phage_CI_repr Location: 773698-773881 bp Feature: domain Description: Phage_CI_repr Location: 774010-774202 bp Feature: domain Description: Phage_CI_repr Location: 774010-7742 02 bp Feature: domain Description: Phage_CI_C Location: 774229-774523 bp Feature: domain Description: Phage_CI_C Location: 7742 2 9-77452 3 bp Feature: gene Location: 1155675-1156814 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1155858-1156758 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1155858-1156758 bp Feature: gene Location: 1156985-1157227 bp Feature: domain Description: DinI Location: 1157036-1157216 bp Feature: domain Description: DinI Location: 1157036-11572 16 bp Feature: gene Location: 1157842-1159329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1158247-1158937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11582 47-1158937 bp Feature: gene Location: 1159408-1159827 bp Feature: domain Description: PRK10276 Location: 1159411-1159822 bp Feature: domain Description: PRK102 76 Location: 1159411-115982 2 bp Feature: gene Location: 1159830-1161095 bp Feature: domain Description: umuC Location: 1159833-1161093 bp Feature: domain Description: umuC Location: 1159833-1161093 bp Feature: gene Location: 1343407-1343529 bp Feature: gene Location: 1343595-1344044 bp Feature: domain Description: PinE Location: 1343604-1344036 bp Feature: domain Description: PinE Location: 1343604-1344036 bp Feature: gene Location: 1345439-1346926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1345844-1346534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1345844-1346534 bp Feature: gene Location: 1346919-1347425 bp Feature: domain Description: PRK10276 Location: 1347009-1347420 bp Feature: domain Description: PRK102 76 Location: 1347009-134742 0 bp Feature: gene Location: 1347427-1348692 bp Feature: domain Description: umuC Location: 1347430-1348690 bp Feature: domain Description: umuC Location: 1347430-1348690 bp Feature: gene Location: 2589476-2590534 bp Feature: domain Description: YccC Location: 2589482-2590520 bp Feature: domain Description: YccC Location: 2 589482 -2 59052 0 bp Feature: gene Location: 2590633-2591106 bp Feature: domain Description: PRK10016 Location: 2590636-2591095 bp Feature: domain Description: PRK10016 Location: 2 590636-2 591095 bp Feature: gene Location: 2591188-2592675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2591593-2592283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 591593-2 592 2 83 bp Feature: gene Location: 2593193-2594356 bp Feature: domain Description: dacD Location: 2593196-2594351 bp Feature: domain Description: dacD Location: 2 593196-2 594351 bp Feature: gene Location: 2594537-2595961 bp Feature: domain Description: SbcB Location: 2594543-2595959 bp Feature: domain Description: SbcB Location: 2 594543-2 595959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)