myRT

myRT report for GCA_000567805.1_Kleb_oxyt_MGH_27_V1

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Seq: KK036986.1 Klebsiella michiganensis strain MGH 27 adjbQ-supercont1.1, whole genome shotgun sequence (5917627 bp)
Overview 1 RT 1: 188258-193213 bp 2 RT 2: 227269-233990 bp 3 RT 3: 1412857-1421410 bp 4 RT 4: 2596010-2602418 bp 5 RT 5: 4384619-4389878 bp 6 RT 6: 4430405-4433516 bp 7 RT 7: 4527550-4533841 bp Neighborhood of RT #1 [188258, 193242] PRK08155 IlvB_leader RVT-GII TisB_tox Acetyltransf_10 Neighborhood of RT #2 [227269, 234115] trmE PRK09692 RVT-Retrons Phage_int_SAM_2 Integrase_1 Neighborhood of RT #3 [1412857, 1421421] EcoRII-N EcoRII-C PRK10458 RVT-GII GIIM KOG2108 KOG2108 KOG2108 ICE_TraI_Pfluor TraI_2_C Neighborhood of RT #4 [2596010, 2602432] dacD Caps_assemb_Wzi RVT-GII PRK10016 YccC Neighborhood of RT #5 [4384619, 4389925] PRK10276 RVT-GII Pectate_lyase_3 RfaL Neighborhood of RT #6 [4430405, 4433516] PRK10597 RVT-GII Neighborhood of RT #7 [4527550, 4533888] UvrB RVT-GII urea_trans_UrtE bioD Feature: gene Location: 188258-189946 bp Feature: domain Description: PRK08155 Location: 188261-189944 bp Feature: domain Description: PRK081 55 Location: 1 88261 -1 89944 bp Feature: gene Location: 190049-190144 bp Feature: domain Description: IlvB_leader Location: 190052-190142 bp Feature: domain Description: IlvB_leader Location: 1 90052-1 901 42 bp Feature: gene Location: 190507-191994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 190912-191602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9091 2-1 91 602 bp Feature: gene Location: 192635-192724 bp Feature: domain Description: TisB_tox Location: 192638-192722 bp Feature: domain Description: TisB_tox Location: 1 92638-1 92722 bp Feature: gene Location: 192796-193242 bp Feature: domain Description: Acetyltransf_10 Location: 192913-193213 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 9291 3-1 9321 3 bp Feature: gene Location: 227269-228633 bp Feature: domain Description: trmE Location: 227272-228631 bp Feature: domain Description: trmE Location: 227272-228631 bp Feature: gene Location: 229149-230171 bp Feature: domain Description: PRK09692 Location: 229164-230112 bp Feature: domain Description: PRK09692 Location: 2291 64-2301 1 2 bp Feature: gene Location: 230595-231185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 230751-231183 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 230751 -231 1 83 bp Feature: gene Location: 231511-232380 bp Feature: gene Location: 233237-234115 bp Feature: domain Description: Phage_int_SAM_2 Location: 233240-233510 bp Feature: domain Description: Phage_int_SAM_2 Location: 233240-23351 0 bp Feature: domain Description: Integrase_1 Location: 233549-233990 bp Feature: domain Description: Integrase_1 Location: 233549-233990 bp Feature: gene Location: 1412857-1414056 bp Feature: domain Description: EcoRII-N Location: 1412902-1413349 bp Feature: domain Description: EcoRII-N Location: 1 41 2902-1 41 3349 bp Feature: domain Description: EcoRII-C Location: 1413535-1414027 bp Feature: domain Description: EcoRII-C Location: 1 41 3535-1 41 4027 bp Feature: gene Location: 1414098-1415531 bp Feature: domain Description: PRK10458 Location: 1414125-1415517 bp Feature: domain Description: PRK1 0458 Location: 1 41 41 25-1 41 551 7 bp Feature: gene Location: 1416714-1418099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1417041-1417659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 7041 -1 41 7659 bp Feature: domain Description: GIIM Note: maturase Location: 1417713-1417938 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 771 3-1 41 7938 bp Feature: gene Location: 1418260-1419735 bp Feature: domain Description: KOG2108 Location: 1418317-1418488 bp Feature: domain Description: KOG21 08 Location: 1 41 831 7-1 41 8488 bp Feature: domain Description: KOG2108 Location: 1418749-1419061 bp Feature: domain Description: KOG21 08 Location: 1 41 8749-1 41 9061 bp Feature: domain Description: KOG2108 Location: 1419358-1419631 bp Feature: domain Description: KOG21 08 Location: 1 41 9358-1 41 9631 bp Feature: gene Location: 1419802-1421421 bp Feature: domain Description: ICE_TraI_Pfluor Location: 1419892-1420513 bp Feature: domain Description: ICE_TraI_Pfluor Location: 1 41 9892-1 42051 3 bp Feature: domain Description: TraI_2_C Location: 1421062-1421410 bp Feature: domain Description: TraI_2_C Location: 1 421 062-1 421 41 0 bp Feature: gene Location: 2596010-2597176 bp Feature: domain Description: dacD Location: 2596013-2597171 bp Feature: domain Description: dacD Location: 259601 3-25971 71 bp Feature: gene Location: 2597330-2598766 bp Feature: domain Description: Caps_assemb_Wzi Location: 2597600-2598725 bp Feature: domain Description: Caps_assemb_Wzi Location: 2597600-2598725 bp Feature: gene Location: 2599233-2600720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599638-2600328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2599638-2600328 bp Feature: gene Location: 2600802-2601275 bp Feature: domain Description: PRK10016 Location: 2600805-2601264 bp Feature: domain Description: PRK1 001 6 Location: 2600805-2601 264 bp Feature: gene Location: 2601374-2602432 bp Feature: domain Description: YccC Location: 2601380-2602418 bp Feature: domain Description: YccC Location: 2601 380-260241 8 bp Feature: gene Location: 4384619-4384801 bp Feature: gene Location: 4384785-4385111 bp Feature: domain Description: PRK10276 Location: 4384797-4384986 bp Feature: domain Description: PRK1 0276 Location: 4384797-4384986 bp Feature: gene Location: 4385428-4386915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4385833-4386523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4385833-4386523 bp Feature: gene Location: 4387433-4388686 bp Feature: domain Description: Pectate_lyase_3 Location: 4387550-4388147 bp Feature: domain Description: Pectate_lyase_3 Location: 4387550-43881 47 bp Feature: gene Location: 4388687-4389925 bp Feature: domain Description: RfaL Location: 4388756-4389878 bp Feature: domain Description: RfaL Location: 4388756-4389878 bp Feature: gene Location: 4430405-4430572 bp Feature: gene Location: 4430719-4430952 bp Feature: domain Description: PRK10597 Location: 4430722-4430947 bp Feature: domain Description: PRK1 0597 Location: 4430722-4430947 bp Feature: gene Location: 4431031-4432518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4431436-4432126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4431 436-44321 26 bp Feature: gene Location: 4433006-4433275 bp Feature: gene Location: 4433388-4433516 bp Feature: gene Location: 4527550-4527642 bp Feature: gene Location: 4527866-4529881 bp Feature: domain Description: UvrB Location: 4527872-4529867 bp Feature: domain Description: UvrB Location: 4527872-4529867 bp Feature: gene Location: 4530339-4531826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530744-4531434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530744-4531 434 bp Feature: gene Location: 4532502-4533224 bp Feature: domain Description: urea_trans_UrtE Location: 4532508-4533198 bp Feature: domain Description: urea_trans_UrtE Location: 4532508-45331 98 bp Feature: gene Location: 4533166-4533888 bp Feature: domain Description: bioD Location: 4533181-4533841 bp Feature: domain Description: bioD Location: 45331 81 -4533841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08155 (acetolactate synthase large subunit), IlvB_leader (pfam08049), RVT-GII, TisB_tox (TIGR04459), Acetyltransf_10 (pfam13673), trmE (PRK05291), PRK09692 (Integrase; provisional), RVT-Retrons, Phage_int_SAM_2 (pfam12834), Integrase_1 (pfam12835)
EcoRII-N (pfam09217), EcoRII-C (pfam09019), PRK10458 (DNA cytosine methylase; Provisional), GIIM (pfam08388), KOG2108 (KOG2108, 3'-5' DNA helicase ), ICE_TraI_Pfluor (TIGR03760), TraI_2_C (pfam07515), dacD (PRK11397), Caps_assemb_Wzi (pfam14052), PRK10016 (DNA gyrase inhibitor SbmC)
YccC (COG1289), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Pectate_lyase_3 (pfam12708), RfaL (COG3307), PRK10597 (DNA damage-inducible protein I; Provisional), UvrB (pfam12344), urea_trans_UrtE (TIGR03410), bioD (TIGR00347)

Seq: KK036987.1 Klebsiella michiganensis strain MGH 27 adjbQ-supercont1.2, whole genome shotgun sequence (196028 bp)
Overview 1 RT 1: 178037-183053 bp Neighborhood of RT #1 [178037, 183055] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 178037-179308 bp Feature: domain Description: umuC Location: 178040-179303 bp Feature: domain Description: umuC Location: 178040-179303 bp Feature: gene Location: 179308-179733 bp Feature: domain Description: PRK10276 Location: 179311-179719 bp Feature: domain Description: PRK102 76 Location: 179311-179719 bp Feature: gene Location: 180135-181646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180540-181254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180540-1812 54 bp Feature: gene Location: 181880-182110 bp Feature: gene Location: 182630-183055 bp Feature: domain Description: Antirestrict Location: 182765-183053 bp Feature: domain Description: Antirestrict Location: 182 765-183053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)