myRT

myRT report for GCA_000567825.1_Kleb_pneu_BIDMC_7A_V2

Download annotations/find similar RTs

Seq: KK037003.1 Klebsiella pneumoniae BIDMC 7A genomic scaffold adjFQ-supercont2.6, whole genome shotgun sequence (120523 bp)
Overview 1 RT 1: 94209-97731 bp Neighborhood of RT #1 [94209, 97736] RVT-GII PRK10276 umuC Feature: gene Location: 94209-95634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94611-95301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9461 1 -95301 bp Feature: gene Location: 96040-96465 bp Feature: domain Description: PRK10276 Location: 96043-96451 bp Feature: domain Description: PRK1 0276 Location: 96043-96451 bp Feature: gene Location: 96465-97736 bp Feature: domain Description: umuC Location: 96468-97731 bp Feature: domain Description: umuC Location: 96468-97731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KK036995.1 Klebsiella pneumoniae BIDMC 7A genomic scaffold adjFQ-supercont2.1, whole genome shotgun sequence (2957207 bp)
Overview 1 RT 1: 306407-309814 bp 2 RT 2: 739703-745308 bp 3 RT 3: 1082240-1087658 bp 4 RT 4: 2441382-2447865 bp Neighborhood of RT #1 [306407, 309915] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [739703, 745334] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1082240, 1087660] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2441382, 2447867] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 306407-307138 bp Feature: domain Description: Laminin_G_3 Location: 306728-307082 bp Feature: domain Description: Laminin_G_3 Location: 30672 8-307082 bp Feature: gene Location: 307135-307344 bp Feature: gene Location: 307797-309281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308199-308889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308199-308889 bp Feature: gene Location: 309359-309598 bp Feature: gene Location: 309598-309915 bp Feature: domain Description: PRK10276 Location: 309604-309718 bp Feature: domain Description: PRK102 76 Location: 309604-309718 bp Feature: domain Description: PRK10276 Location: 309745-309814 bp Feature: domain Description: PRK102 76 Location: 309745-309814 bp Feature: gene Location: 739703-740266 bp Feature: domain Description: YbjK Location: 739709-740246 bp Feature: domain Description: YbjK Location: 739709-7402 46 bp Feature: gene Location: 740389-741441 bp Feature: domain Description: int Location: 740392-741391 bp Feature: domain Description: int Location: 740392 -741391 bp Feature: gene Location: 741860-743344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742262-742952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 742 2 62 -742 952 bp Feature: gene Location: 743443-744387 bp Feature: gene Location: 744399-745334 bp Feature: domain Description: Phage_CI_repr Location: 744483-744666 bp Feature: domain Description: Phage_CI_repr Location: 744483-744666 bp Feature: domain Description: Phage_CI_repr Location: 744795-744987 bp Feature: domain Description: Phage_CI_repr Location: 744795-744987 bp Feature: domain Description: Phage_CI_C Location: 745014-745308 bp Feature: domain Description: Phage_CI_C Location: 745014-745308 bp Feature: gene Location: 1082240-1083379 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1082423-1083323 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1082 42 3-108332 3 bp Feature: gene Location: 1083550-1083792 bp Feature: domain Description: DinI Location: 1083601-1083781 bp Feature: domain Description: DinI Location: 1083601-1083781 bp Feature: gene Location: 1084410-1085894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1084812-1085502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1084812 -1085502 bp Feature: gene Location: 1085973-1086392 bp Feature: domain Description: PRK10276 Location: 1085976-1086387 bp Feature: domain Description: PRK102 76 Location: 1085976-1086387 bp Feature: gene Location: 1086395-1087660 bp Feature: domain Description: umuC Location: 1086398-1087658 bp Feature: domain Description: umuC Location: 1086398-1087658 bp Feature: gene Location: 2441382-2442440 bp Feature: domain Description: YccC Location: 2441388-2442426 bp Feature: domain Description: YccC Location: 2 441388-2 442 42 6 bp Feature: gene Location: 2442539-2443012 bp Feature: domain Description: PRK10016 Location: 2442542-2443001 bp Feature: domain Description: PRK10016 Location: 2 442 542 -2 443001 bp Feature: gene Location: 2443094-2444578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2443496-2444186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 443496-2 444186 bp Feature: gene Location: 2445099-2446262 bp Feature: domain Description: dacD Location: 2445102-2446257 bp Feature: domain Description: dacD Location: 2 445102 -2 4462 57 bp Feature: gene Location: 2446443-2447867 bp Feature: domain Description: SbcB Location: 2446449-2447865 bp Feature: domain Description: SbcB Location: 2 446449-2 447865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)