myRT

myRT report for GCA_000568595.1_NBIMC_P1-C1

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Seq: AVBK01000042.1 Afipia sp. NBIMC_P1-C1 NBIMC_P1-C1_contig_42, whole genome shotgun sequence (20731 bp)
Overview 1 RT 1: 5397-15012 bp Neighborhood of RT #1 [5397, 15299] YhaN MPP_Mre11_N RVT-Retrons DEXQc_UvrD DEXQc_UvrD recB YbjD YbjD Feature: gene Location: 5397-8900 bp Feature: domain Description: YhaN Location: 5400-8865 bp Feature: domain Description: YhaN Location: 5400-8865 bp Feature: gene Location: 8904-10172 bp Feature: domain Description: MPP_Mre11_N Location: 8916-9570 bp Feature: domain Description: MPP_Mre1 1 _N Location: 891 6-9570 bp Feature: gene Location: 10640-12418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10772-11393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0772-1 1 393 bp Feature: gene Location: 12520-13668 bp Feature: domain Description: DEXQc_UvrD Location: 12529-12712 bp Feature: domain Description: DEXQc_UvrD Location: 1 2529-1 271 2 bp Feature: domain Description: DEXQc_UvrD Location: 12901-13102 bp Feature: domain Description: DEXQc_UvrD Location: 1 2901 -1 31 02 bp Feature: domain Description: recB Location: 13558-13609 bp Feature: domain Description: recB Location: 1 3558-1 3609 bp Feature: gene Location: 13665-15299 bp Feature: domain Description: YbjD Location: 13668-13809 bp Feature: domain Description: YbjD Location: 1 3668-1 3809 bp Feature: domain Description: YbjD Location: 14352-15012 bp Feature: domain Description: YbjD Location: 1 4352-1 501 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhaN (COG4717), MPP_Mre11_N (cd00840), RVT-Retrons, DEXQc_UvrD (cd17932), recB (TIGR00609), YbjD (COG3593)

Seq: AVBK01000090.1 Afipia sp. NBIMC_P1-C1 plasmid pAC140 NBIMC_P1-C1_contig_p, whole genome shotgun sequence (139998 bp)
Overview 1 RT 1: 39415-49282 bp Neighborhood of RT #1 [39415, 49317] YbjD YbjD DEXQc_UvrD DEXQc_UvrD recB RVT-Retrons MPP_Mre11_N YhaN Feature: gene Location: 39415-41049 bp Feature: domain Description: YbjD Location: 39418-39559 bp Feature: domain Description: YbjD Location: 39418-39559 bp Feature: domain Description: YbjD Location: 40102-40762 bp Feature: domain Description: YbjD Location: 40102 -40762 bp Feature: gene Location: 41046-42194 bp Feature: domain Description: DEXQc_UvrD Location: 41055-41238 bp Feature: domain Description: DEXQc_UvrD Location: 41055-412 38 bp Feature: domain Description: DEXQc_UvrD Location: 41427-41628 bp Feature: domain Description: DEXQc_UvrD Location: 4142 7-4162 8 bp Feature: domain Description: recB Location: 42084-42135 bp Feature: domain Description: recB Location: 42 084-42 135 bp Feature: gene Location: 42296-44074 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42428-43049 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 42 8-43049 bp Feature: gene Location: 44542-45810 bp Feature: domain Description: MPP_Mre11_N Location: 44554-45208 bp Feature: domain Description: MPP_Mre11_N Location: 44554-452 08 bp Feature: gene Location: 45814-49317 bp Feature: domain Description: YhaN Location: 45817-49282 bp Feature: domain Description: YhaN Location: 45817-492 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), DEXQc_UvrD (cd17932), recB (TIGR00609), RVT-Retrons, MPP_Mre11_N (cd00840), YhaN (COG4717)