myRT

myRT report for GCA_000576675.1_SOAPdenovo2.04

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Seq: KK070035.1 Pseudoalteromonas lipolytica SCSIO 04301 genomic scaffold Scaffold3, whole genome shotgun sequence (876299 bp)
Overview 1 RT 1: 430596-436625 bp Neighborhood of RT #1 [430596, 436885] RVT-UG8 RVT-UG3 DUF2779 Feature: gene Location: 430596-430979 bp Feature: gene Location: 431073-431309 bp Feature: gene Location: 431512-433500 bp Ori: EWH05767.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 432037-432481 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 432037-432481 bp Feature: gene Location: 433500-434735 bp Ori: EWH05768.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 433788-434265 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 433788-434265 bp Feature: gene Location: 434754-435383 bp Feature: gene Location: 435401-436885 bp Ori: EWH05770.1 Feature: domain Description: DUF2779 Location: 436289-436625 bp Feature: domain Description: DUF2779 Location: 436289-436625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, DUF2779 (pfam11074)

Seq: KK070034.1 Pseudoalteromonas lipolytica SCSIO 04301 genomic scaffold Scaffold2, whole genome shotgun sequence (1154429 bp)
Overview 1 RT 1: 498721-505886 bp Neighborhood of RT #1 [498721, 505886] AAA_15 AAA_15 TOPRIM_OLD RVT-UG16 HTH_29 rve HTH_29 Feature: gene Location: 498721-499494 bp Feature: gene Location: 499583-501229 bp Ori: EWH06175.1 Feature: domain Description: AAA_15 Location: 499586-499838 bp Feature: domain Description: AAA_15 Location: 499586-499838 bp Feature: domain Description: AAA_15 Location: 500051-500588 bp Feature: domain Description: AAA_15 Location: 500051-500588 bp Feature: domain Description: TOPRIM_OLD Location: 500741-500981 bp Feature: domain Description: TOPRIM_OLD Location: 500741-500981 bp Feature: gene Location: 501582-503066 bp Ori: EWH06176.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 501945-502353 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 501945-502 353 bp Feature: gene Location: 503774-505294 bp Ori: EWH06177.1 Feature: domain Description: HTH_29 Location: 503816-503945 bp Feature: domain Description: HTH_2 9 Location: 503816-503945 bp Feature: domain Description: rve Location: 504185-504530 bp Feature: domain Description: rve Location: 504185-504530 bp Feature: domain Description: HTH_29 Location: 504938-505103 bp Feature: domain Description: HTH_2 9 Location: 504938-505103 bp Feature: gene Location: 505482-505886 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RVT-UG16, HTH_29 (pfam13551), rve (pfam00665)