myRT

myRT report for GCA_000582925.1_ASM58292v1

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Seq: JFCC01000032.1 Acinetobacter sp. 1294596 ab1294596.contig.31, whole genome shotgun sequence (35635 bp)
Overview 1 RT 1: 8288-14910 bp Neighborhood of RT #1 [8288, 14910] Rep_3 DDE_Tnp_1_5 RVT-GII GIIM PHA02517 rve_2 RVT-G2L Feature: gene Location: 8288-9271 bp Ori: EXF56500.1 Feature: domain Description: Rep_3 Location: 8333-8999 bp Feature: domain Description: Rep_3 Location: 8333-8999 bp Feature: gene Location: 10607-11218 bp Ori: EXF56501.1 Feature: domain Description: DDE_Tnp_1_5 Location: 10673-10997 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 1 0673-1 0997 bp Feature: gene Location: 11199-11837 bp Ori: EXF56502.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11217-11451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 21 7-1 1 451 bp Feature: domain Description: GIIM Note: maturase Location: 11529-11760 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 529-1 1 760 bp Feature: gene Location: 11928-12245 bp Ori: EXF56503.1 Feature: domain Description: PHA02517 Location: 11931-12174 bp Feature: domain Description: PHA0251 7 Location: 1 1 931 -1 21 74 bp Feature: gene Location: 12230-12343 bp Ori: EXF56504.1 Feature: domain Description: rve_2 Location: 12233-12326 bp Feature: domain Description: rve_2 Location: 1 2233-1 2326 bp Feature: gene Location: 12610-13152 bp Feature: gene Location: 13180-14376 bp Ori: EXF56506.1 Feature: RT Description: RVT-G2L Note: G2L RT Location: 13393-14062 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 1 3393-1 4062 bp Feature: gene Location: 14366-14671 bp Feature: gene Location: 14746-14910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), rve_2 (pfam13333), RVT-G2L