myRT

myRT report for GCA_000585075.1_capba93

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Seq: JEMY01000039.1 Candidatus Accumulibacter sp. BA-93 contig000039, whole genome shotgun sequence (26291 bp)
Overview 1 RT 1: 10-4641 bp Neighborhood of RT #1 [10, 4641] KfrA_N RVT-GII GIIM LysR Feature: gene Location: 10-642 bp Feature: domain Description: KfrA_N Location: 16-355 bp Feature: domain Description: KfrA_N Location: 1 6-355 bp Feature: gene Location: 1750-2943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1909-2521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 909-2521 bp Feature: domain Description: GIIM Note: maturase Location: 2581-2791 bp Feature: domain Description: GIIM Note: maturase Location: 2581 -2791 bp Feature: gene Location: 3036-4022 bp Feature: domain Description: LysR Location: 3042-3927 bp Feature: domain Description: LysR Location: 3042-3927 bp Feature: gene Location: 4426-4641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KfrA_N (pfam11740), RVT-GII, GIIM (pfam08388), LysR (COG0583)

Seq: JEMY01000009.1 Candidatus Accumulibacter sp. BA-93 contig000009, whole genome shotgun sequence (51263 bp)
Overview 1 RT 1: 14239-23671 bp Neighborhood of RT #1 [14239, 23709] COG5635 pfam03781 Avd_like RVT-DGRs COG5635 pfam03781 PaaI_thioesterase Feature: gene Location: 14239-17385 bp Feature: domain Description: COG5635 Location: 15037-16171 bp Feature: domain Description: COG5635 Location: 15037-16171 bp Feature: domain Description: pfam03781 Location: 16675-17362 bp Feature: domain Description: pfam03781 Location: 16675-17362 bp Feature: gene Location: 17921-18325 bp Feature: domain Description: Avd_like Location: 17948-18260 bp Feature: domain Description: Avd_like Location: 17948-182 60 bp Feature: gene Location: 18490-19551 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18688-19402 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 18688-19402 bp Feature: gene Location: 19876-22983 bp Feature: domain Description: COG5635 Location: 20572-21901 bp Feature: domain Description: COG5635 Location: 2 0572 -2 1901 bp Feature: domain Description: pfam03781 Location: 22336-22960 bp Feature: domain Description: pfam03781 Location: 2 2 336-2 2 960 bp Feature: gene Location: 23233-23709 bp Feature: domain Description: PaaI_thioesterase Location: 23335-23671 bp Feature: domain Description: PaaI_thioesterase Location: 2 3335-2 3671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs, PaaI_thioesterase (cd03443)

Seq: JEMY01000008.1 Candidatus Accumulibacter sp. BA-93 contig000008, whole genome shotgun sequence (149737 bp)
Overview 1 RT 1: 15619-24698 bp Neighborhood of RT #1 [15619, 24703] Arm-DNA-bind_3 INT_P4_C DUF4236 RVT-GII GIIM PEP-CTERM RVT-GII GIIM YiaG Feature: gene Location: 15619-16932 bp Feature: domain Description: Arm-DNA-bind_3 Location: 15640-15898 bp Feature: domain Description: Arm-DNA-bind_3 Location: 15640-15898 bp Feature: domain Description: INT_P4_C Location: 16354-16816 bp Feature: domain Description: INT_P4_C Location: 163 54-16816 bp Feature: gene Location: 17408-18622 bp Feature: domain Description: DUF4236 Location: 17420-17579 bp Feature: domain Description: DUF423 6 Location: 17420-17579 bp Feature: gene Location: 18795-20132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19086-19743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19086-19743 bp Feature: domain Description: GIIM Note: maturase Location: 19818-20028 bp Feature: domain Description: GIIM Note: maturase Location: 19818-20028 bp Feature: gene Location: 21200-22153 bp Feature: domain Description: PEP-CTERM Location: 22073-22139 bp Feature: domain Description: PEP-CTERM Location: 22073 -2213 9 bp Feature: gene Location: 22291-23100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22303-22714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 223 03 -22714 bp Feature: domain Description: GIIM Note: maturase Location: 22786-22996 bp Feature: domain Description: GIIM Note: maturase Location: 22786-22996 bp Feature: gene Location: 23840-24007 bp Feature: gene Location: 24404-24703 bp Feature: domain Description: YiaG Location: 24428-24698 bp Feature: domain Description: YiaG Location: 24428-24698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), DUF4236 (pfam14020), RVT-GII, GIIM (pfam08388), PEP-CTERM, YiaG (COG2944)

Seq: JEMY01000023.1 Candidatus Accumulibacter sp. BA-93 contig000023, whole genome shotgun sequence (18517 bp)
Overview 1 RT 1: 9510-14407 bp Neighborhood of RT #1 [9510, 14407] xerD Phage_int_SAM_1 INT_RitA_C_like GIIM RVT-GII Feature: gene Location: 9510-10760 bp Feature: domain Description: xerD Location: 9585-9732 bp Feature: domain Description: xerD Location: 9585-9732 bp Feature: domain Description: Phage_int_SAM_1 Location: 9879-10116 bp Feature: domain Description: Phage_int_SAM_1 Location: 9879-10116 bp Feature: domain Description: INT_RitA_C_like Location: 10209-10734 bp Feature: domain Description: INT_RitA_C_like Location: 10209-10734 bp Feature: gene Location: 11171-11467 bp Feature: domain Description: GIIM Note: maturase Location: 11177-11378 bp Feature: domain Description: GIIM Note: maturase Location: 11177-11378 bp Feature: gene Location: 11559-12476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11829-12459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11829-124 59 bp Feature: gene Location: 13060-13695 bp Feature: gene Location: 14045-14407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, xerD (PRK02436), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)

Seq: JEMY01000054.1 Candidatus Accumulibacter sp. BA-93 contig000054, whole genome shotgun sequence (25225 bp)
Overview 1 RT 1: 3308-6996 bp Neighborhood of RT #1 [3308, 6996] TDT_like_3 RVT-GII GIIM PEP-CTERM Feature: gene Location: 3308-4372 bp Feature: domain Description: TDT_like_3 Location: 3371-4328 bp Feature: domain Description: TDT_like_3 Location: 3371-4328 bp Feature: gene Location: 4471-4722 bp Feature: gene Location: 4735-5517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4807-5074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4807-5 074 bp Feature: domain Description: GIIM Note: maturase Location: 5122-5347 bp Feature: domain Description: GIIM Note: maturase Location: 5 122-5 347 bp Feature: gene Location: 5757-6515 bp Feature: domain Description: PEP-CTERM Location: 6441-6501 bp Feature: domain Description: PEP-CTERM Location: 6441-65 01 bp Feature: gene Location: 6907-6996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TDT_like_3 (cd09321), RVT-GII, GIIM (pfam08388), PEP-CTERM