myRT

myRT report for GCA_000586275.1_ATCC_33216

Download annotations/find similar RTs

Seq: KK074204.1 Legionella pneumophila subsp. fraseri strain ATCC 33216 genomic scaffold Scaffold15, whole genome shotgun sequence (51290 bp)
Overview 1 RT 1: 90-2632 bp Neighborhood of RT #1 [90, 2724] RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 90-1244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-492 bp Feature: domain Description: RVT_1 Location: 546-864 bp Feature: domain Description: RVT_1 Location: 546-864 bp Feature: domain Description: GIIM Note: maturase Location: 942-1161 bp Feature: domain Description: GIIM Note: maturase Location: 942-1 1 61 bp Feature: gene Location: 1781-2074 bp Feature: domain Description: InsE Location: 1790-2054 bp Feature: domain Description: InsE Location: 1 790-2054 bp Feature: gene Location: 2164-2724 bp Feature: domain Description: HTH_23 Location: 2251-2374 bp Feature: domain Description: HTH_23 Location: 2251 -2374 bp Feature: domain Description: HTH_33 Location: 2467-2632 bp Feature: domain Description: HTH_33 Location: 2467-2632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: JFIK01000022.1 Legionella pneumophila subsp. fraseri strain ATCC 33216 contig022, whole genome shotgun sequence (49780 bp)
Overview 1 RT 1: 46938-49414 bp Neighborhood of RT #1 [46938, 49680] Tra_M RVT_N RVT-GII GIIM Feature: gene Location: 46938-47312 bp Feature: domain Description: Tra_M Location: 46986-47181 bp Feature: domain Description: Tra_M Location: 46986-47181 bp Feature: gene Location: 47772-47924 bp Feature: gene Location: 48160-49680 bp Feature: domain Description: RVT_N Location: 48217-48460 bp Feature: domain Description: RVT_N Location: 482 17-48460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48505-49129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48505-4912 9 bp Feature: domain Description: GIIM Note: maturase Location: 49180-49414 bp Feature: domain Description: GIIM Note: maturase Location: 49180-49414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JFIK01000026.1 Legionella pneumophila subsp. fraseri strain ATCC 33216 contig026, whole genome shotgun sequence (37196 bp)
Overview 1 RT 1: 33134-37148 bp Neighborhood of RT #1 [33134, 37148] RVT-UG18 Feature: gene Location: 33134-33295 bp Feature: gene Location: 33463-34476 bp Feature: gene Location: 34974-35339 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 34977-35337 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 3 4977-3 53 3 7 bp Feature: gene Location: 35361-35663 bp Feature: gene Location: 35817-37148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18