myRT

myRT report for GCA_000593325.2_vpVPTS2009

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Seq: KK081893.1 Vibrio parahaemolyticus VPTS-2009 genomic scaffold vpVPTS2009.contig.4, whole genome shotgun sequence (330058 bp)
Overview 1 RT 1: 132557-137636 bp Neighborhood of RT #1 [132557, 137809] PBP2_lipoprotein_MetQ_like RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 132557-132832 bp Feature: gene Location: 132954-133757 bp Ori: EXJ28843.1 Feature: domain Description: PBP2_lipoprotein_MetQ_like Location: 133047-133722 bp Feature: domain Description: PBP2_lipoprotein_MetQ_like Location: 1 33047-1 33722 bp Feature: gene Location: 134581-135504 bp Ori: EXJ29129.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 134683-135274 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 34683-1 35274 bp Feature: gene Location: 135506-137137 bp Ori: EXJ29004.1 Feature: domain Description: COG3950 Location: 135695-137081 bp Feature: domain Description: COG3950 Location: 1 35695-1 37081 bp Feature: gene Location: 137141-137809 bp Ori: EXJ28970.1 Feature: domain Description: TIGR02646 Location: 137213-137636 bp Feature: domain Description: TIGR02646 Location: 1 3721 3-1 37636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_lipoprotein_MetQ_like (cd13526), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)