myRT

myRT report for GCA_000598165.1_ASM59816v1

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Seq: JGCU01000334.1 Bacteroides fragilis str. 3976T7 gbf3976T7.contig.336, whole genome shotgun sequence (1240 bp)
Overview 1 RT 1: 1-967 bp Neighborhood of RT #1 [1, 1240] RVT-CRISPR-like Feature: gene Location: 1-134 bp Feature: gene Location: 154-1240 bp Ori: EXY53701.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 361-967 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 361 -967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JGCU01000422.1 Bacteroides fragilis str. 3976T7 gbf3976T7.contig.426, whole genome shotgun sequence (27262 bp)
Overview 1 RT 1: 51-2280 bp Neighborhood of RT #1 [51, 2280] RVT-DGRs Feature: gene Location: 51-1352 bp Ori: EXY53342.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 264-861 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 64-861 bp Feature: gene Location: 1349-1834 bp Feature: gene Location: 2095-2280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGCU01000423.1 Bacteroides fragilis str. 3976T7 gbf3976T7.contig.427, whole genome shotgun sequence (45669 bp)
Overview 1 RT 1: 15685-20728 bp Neighborhood of RT #1 [15685, 20728] RVT-UG27 Feature: gene Location: 15685-16773 bp Feature: gene Location: 16770-17249 bp Feature: gene Location: 18119-19363 bp Ori: EXY53302.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 18287-18923 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 18287-18923 bp Feature: gene Location: 19402-20028 bp Feature: gene Location: 20072-20728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: JGCU01000052.1 Bacteroides fragilis str. 3976T7 gbf3976T7.contig.51, whole genome shotgun sequence (90066 bp)
Overview 1 RT 1: 44514-53472 bp Neighborhood of RT #1 [44514, 53480] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 44514-46703 bp Ori: EXY56988.1 Feature: domain Description: GlnA3 Location: 44589-46701 bp Feature: domain Description: GlnA3 Location: 4 4 589-4 6701 bp Feature: gene Location: 47006-49162 bp Feature: gene Location: 49369-50481 bp Ori: EXY56990.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49684-50233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 9684 -50233 bp Feature: gene Location: 50623-52416 bp Ori: EXY56991.1 Feature: domain Description: rpsA Location: 50701-52309 bp Feature: domain Description: rpsA Location: 50701-52309 bp Feature: gene Location: 52566-53480 bp Ori: EXY56992.1 Gene: rnz Feature: domain Description: RNase_Z Location: 52581-53472 bp Feature: domain Description: RNase_Z Location: 52581-534 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGCU01000377.1 Bacteroides fragilis str. 3976T7 gbf3976T7.contig.380, whole genome shotgun sequence (27704 bp)
Overview 1 RT 1: 1-1056 bp 2 RT 2: 20357-27705 bp Neighborhood of RT #1 [1, 1056] RVT-DGRs Neighborhood of RT #2 [20357, 27704] RVT-DGRs Feature: gene Location: 1-447 bp Ori: EXY53485.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-448 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-448 bp Feature: gene Location: 643-756 bp Feature: gene Location: 823-1056 bp Feature: gene Location: 20357-20545 bp Feature: gene Location: 20571-27062 bp Feature: gene Location: 27258-27704 bp Ori: EXY53510.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27471-27705 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27471-27705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs