myRT

myRT report for GCA_000598185.2_ASM59818v2

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Seq: JGCV01000218.1 Bacteroides fragilis str. 3986T(B)10 gbf3986TB10.contig.219, whole genome shotgun sequence (2562 bp)
Overview 1 RT 1: 96-2551 bp Neighborhood of RT #1 [96, 2562] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Feature: gene Location: 96-2366 bp Ori: EXY58322.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 303-909 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 303-909 bp Feature: domain Description: Cas1_I-II-III Location: 1368-2325 bp Feature: domain Description: Cas1 _I-II-III Location: 1 368-2325 bp Feature: gene Location: 2386-2562 bp Ori: EXY58323.1 Feature: domain Description: Cmr6_III-B Location: 2440-2551 bp Feature: domain Description: Cmr6_III-B Location: 2440-2551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661)

Seq: JGCV01000039.1 Bacteroides fragilis str. 3986T(B)10 gbf3986TB10.contig.38, whole genome shotgun sequence (108230 bp)
Overview 1 RT 1: 40338-47067 bp Neighborhood of RT #1 [40338, 47075] RVT-Retrons rpsA RNase_Z Feature: gene Location: 40338-40478 bp Feature: gene Location: 40601-42757 bp Feature: gene Location: 42964-44076 bp Ori: EXY61472.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43279-43828 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 432 79-4382 8 bp Feature: gene Location: 44218-46011 bp Ori: EXY61473.1 Feature: domain Description: rpsA Location: 44296-45904 bp Feature: domain Description: rpsA Location: 442 96-45904 bp Feature: gene Location: 46161-47075 bp Ori: EXY61474.1 Gene: rnz Feature: domain Description: RNase_Z Location: 46176-47067 bp Feature: domain Description: RNase_Z Location: 46176-47067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGCV01000045.1 Bacteroides fragilis str. 3986T(B)10 gbf3986TB10.contig.44, whole genome shotgun sequence (27596 bp)
Overview 1 RT 1: 1-3230 bp Neighborhood of RT #1 [1, 3262] RVT-Retrons Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 1-708 bp Ori: EXY61352.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16-538 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16-53 8 bp Feature: gene Location: 739-1620 bp Feature: gene Location: 2261-3262 bp Ori: EXY61354.1 Feature: domain Description: Phage_int_SAM_5 Location: 2441-2711 bp Feature: domain Description: Phage_int_SAM_5 Location: 2441-2711 bp Feature: domain Description: INTN1_C_like Location: 2774-3230 bp Feature: domain Description: INTN1_C_like Location: 2774-3 23 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: JGCV01000190.1 Bacteroides fragilis str. 3986T(B)10 gbf3986TB10.contig.191, whole genome shotgun sequence (25375 bp)
Overview 1 RT 1: 2412-6361 bp Neighborhood of RT #1 [2412, 6361] RVT-DGRs Feature: gene Location: 2412-2792 bp Feature: gene Location: 2789-3217 bp Feature: gene Location: 3180-4367 bp Ori: EXY58543.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3513-4140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3513-4 14 0 bp Feature: gene Location: 4700-6061 bp Feature: gene Location: 6071-6361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs