myRT

myRT report for GCA_000598325.1_ASM59832v1

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Seq: JGCS01000428.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.428, whole genome shotgun sequence (28714 bp)
Overview 1 RT 1: 7987-13030 bp Neighborhood of RT #1 [7987, 13030] RVT-UG27 Feature: gene Location: 7987-8643 bp Feature: gene Location: 8687-9313 bp Feature: gene Location: 9352-10596 bp Ori: EXY43643.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9520-10156 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 9520-1 01 56 bp Feature: gene Location: 11466-11945 bp Feature: gene Location: 11942-13030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: JGCS01000408.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.408, whole genome shotgun sequence (26979 bp)
Overview 1 RT 1: 1-1071 bp Neighborhood of RT #1 [1, 1071] RVT-DGRs Feature: gene Location: 1-462 bp Ori: EXY43775.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 14-460 bp Feature: gene Location: 658-771 bp Feature: gene Location: 838-1071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGCS01000351.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.351, whole genome shotgun sequence (26885 bp)
Overview 1 RT 1: 1-2545 bp Neighborhood of RT #1 [1, 2545] RVT-DGRs Feature: gene Location: 1-120 bp Feature: gene Location: 316-1617 bp Ori: EXY44013.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1126 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1126 bp Feature: gene Location: 1614-2099 bp Feature: gene Location: 2381-2545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGCS01000289.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.289, whole genome shotgun sequence (2047 bp)
Overview 1 RT 1: 1-2047 bp Neighborhood of RT #1 [1, 2047] RVT-DGRs Feature: gene Location: 1-462 bp Ori: EXY44299.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-460 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214 -4 60 bp Feature: gene Location: 658-2047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGCS01000400.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.400, whole genome shotgun sequence (1251 bp)
Overview 1 RT 1: 1-1251 bp Neighborhood of RT #1 [1, 1251] RVT-CRISPR-like Feature: gene Location: 1-1051 bp Ori: EXY43819.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 208-814 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 208-814 bp Feature: gene Location: 1071-1251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JGCS01000057.1 Bacteroides fragilis str. 3783N1-2 gbf3783N12.contig.56, whole genome shotgun sequence (91085 bp)
Overview 1 RT 1: 44435-53393 bp Neighborhood of RT #1 [44435, 53401] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 44435-46615 bp Ori: EXY47502.1 Feature: domain Description: GlnA3 Location: 44501-46613 bp Feature: domain Description: GlnA3 Location: 44501-46 6 13 bp Feature: gene Location: 46927-49083 bp Feature: gene Location: 49290-50402 bp Ori: EXY47499.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49605-50154 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 496 05-50154 bp Feature: gene Location: 50544-52337 bp Ori: EXY47521.1 Feature: domain Description: rpsA Location: 50622-52230 bp Feature: domain Description: rpsA Location: 506 22-52230 bp Feature: gene Location: 52487-53401 bp Ori: EXY47486.1 Gene: rnz Feature: domain Description: RNase_Z Location: 52502-53393 bp Feature: domain Description: RNase_Z Location: 52502-53393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)