myRT

myRT report for GCA_000598445.1_ASM59844v1

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Seq: JGCW01000526.1 Bacteroides fragilis str. 3986 N(B)19 gbf3986NB19.contig.530, whole genome shotgun sequence (1670 bp)
Overview 1 RT 1: 1-1670 bp Neighborhood of RT #1 [1, 1670] RVT_N RVT-GII Feature: gene Location: 1-863 bp Feature: RT Description: RVT_N Location: 55-298 bp Feature: RT Description: RVT_N Location: 55-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 343-859 bp Feature: gene Location: 1501-1670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JGCW01000087.1 Bacteroides fragilis str. 3986 N(B)19 gbf3986NB19.contig.86, whole genome shotgun sequence (52842 bp)
Overview 1 RT 1: 10874-19833 bp Neighborhood of RT #1 [10874, 19841] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 10874-13063 bp Feature: domain Description: GlnA3 Location: 10949-13061 bp Feature: domain Description: GlnA3 Location: 10949-13061 bp Feature: gene Location: 13366-15522 bp Feature: gene Location: 15729-16841 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16044-16593 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16044-16593 bp Feature: gene Location: 16983-18776 bp Feature: domain Description: rpsA Location: 17061-18669 bp Feature: domain Description: rpsA Location: 17061-18669 bp Feature: gene Location: 18927-19841 bp Feature: domain Description: RNase_Z Location: 18942-19833 bp Feature: domain Description: RNase_Z Location: 18942 -19833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGCW01000748.1 Bacteroides fragilis str. 3986 N(B)19 gbf3986NB19.contig.754, whole genome shotgun sequence (802 bp)
Overview 1 RT 1: 34-799 bp Neighborhood of RT #1 [34, 802] RVT_N RVT-GII Feature: gene Location: 34-802 bp Feature: RT Description: RVT_N Location: 88-331 bp Feature: RT Description: RVT_N Location: 88-3 3 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 76-799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII