myRT

myRT report for GCA_000598505.1_ASM59850v1

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Seq: JGDE01000177.1 Bacteroides fragilis str. DS-208 gbfDS208.contig.179, whole genome shotgun sequence (13536 bp)
Overview 1 RT 1: 7738-12120 bp Neighborhood of RT #1 [7738, 12143] Avd_like RVT-DGRs YbdN Feature: gene Location: 7738-8220 bp Feature: gene Location: 8238-8609 bp Ori: EXZ03235.1 Feature: domain Description: Avd_like Location: 8265-8568 bp Feature: domain Description: Avd_like Location: 8265-8568 bp Feature: gene Location: 9371-10444 bp Ori: EXZ03236.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9374-10001 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9374-1 0001 bp Feature: gene Location: 10542-10859 bp Feature: gene Location: 10881-12143 bp Ori: EXZ03238.1 Feature: domain Description: YbdN Location: 10887-12120 bp Feature: domain Description: YbdN Location: 1 0887-1 21 20 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, YbdN (COG3969)

Seq: JGDE01000035.1 Bacteroides fragilis str. DS-208 gbfDS208.contig.34, whole genome shotgun sequence (143383 bp)
Overview 1 RT 1: 73633-80362 bp Neighborhood of RT #1 [73633, 80370] RVT-Retrons rpsA RNase_Z Feature: gene Location: 73633-73773 bp Feature: gene Location: 73896-76052 bp Feature: gene Location: 76259-77371 bp Ori: EXZ06598.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76574-77123 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76574-7712 3 bp Feature: gene Location: 77513-79306 bp Ori: EXZ06675.1 Feature: domain Description: rpsA Location: 77591-79199 bp Feature: domain Description: rpsA Location: 77591-79199 bp Feature: gene Location: 79456-80370 bp Ori: EXZ06703.1 Gene: rnz Feature: domain Description: RNase_Z Location: 79471-80362 bp Feature: domain Description: RNase_Z Location: 79471-80362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)