myRT

myRT report for GCA_000598545.2_ASM59854v2

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Seq: JGDK01000097.1 Bacteroides fragilis str. 1007-1-F #4 gbf10071F4.contig.96, whole genome shotgun sequence (441791 bp)
Overview 1 RT 1: 16105-25063 bp 2 RT 2: 116434-119871 bp Neighborhood of RT #1 [16105, 25071] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [116434, 119871] RVT-DGRs Feature: gene Location: 16105-18294 bp Ori: EXZ35108.1 Feature: domain Description: GlnA3 Location: 16180-18292 bp Feature: domain Description: GlnA3 Location: 1 61 80-1 8292 bp Feature: gene Location: 18597-20753 bp Feature: gene Location: 20960-22072 bp Ori: EXZ35111.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21275-21824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 275-21 824 bp Feature: gene Location: 22214-24007 bp Ori: EXZ34805.1 Feature: domain Description: rpsA Location: 22292-23900 bp Feature: domain Description: rpsA Location: 22292-23900 bp Feature: gene Location: 24157-25071 bp Ori: EXZ34791.1 Gene: rnz Feature: domain Description: RNase_Z Location: 24172-25063 bp Feature: domain Description: RNase_Z Location: 241 72-25063 bp Feature: gene Location: 116434-116748 bp Feature: gene Location: 116748-117125 bp Feature: gene Location: 117106-118146 bp Ori: EXZ35063.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 117316-117940 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 731 6-1 1 7940 bp Feature: gene Location: 118264-118413 bp Feature: gene Location: 118444-119871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), RVT-DGRs

Seq: JGDK01000116.1 Bacteroides fragilis str. 1007-1-F #4 gbf10071F4.contig.115, whole genome shotgun sequence (66731 bp)
Overview 1 RT 1: 39055-42661 bp Neighborhood of RT #1 [39055, 42702] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 39055-39465 bp Ori: EXZ33661.1 Feature: domain Description: Cas_Cmr5 Location: 39103-39349 bp Feature: domain Description: Cas_Cmr5 Location: 39103-39349 bp Feature: gene Location: 39468-40412 bp Ori: EXZ33656.1 Feature: domain Description: Cmr6_III-B Location: 39624-40401 bp Feature: domain Description: Cmr6_III-B Location: 3962 4-40401 bp Feature: gene Location: 40432-42702 bp Ori: EXZ33665.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 40639-41245 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 40639-412 45 bp Feature: domain Description: Cas1_I-II-III Location: 41704-42661 bp Feature: domain Description: Cas1_I-II-III Location: 41704-42 661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)