myRT

myRT report for GCA_000598665.1_ASM59866v1

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Seq: JGDX01000243.1 Bacteroides fragilis str. S23 R14 gbfS23R14.contig.242, whole genome shotgun sequence (10073 bp)
Overview 1 RT 1: 197-3728 bp Neighborhood of RT #1 [197, 3844] RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Feature: gene Location: 197-2467 bp Ori: EXZ97566.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 404-1010 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 404-1 01 0 bp Feature: domain Description: Cas1_I-II-III Location: 1469-2426 bp Feature: domain Description: Cas1 _I-II-III Location: 1 469-2426 bp Feature: gene Location: 2487-3431 bp Ori: EXZ97567.1 Feature: domain Description: Cmr6_III-B Location: 2643-3420 bp Feature: domain Description: Cmr6_III-B Location: 2643-3420 bp Feature: gene Location: 3434-3844 bp Ori: EXZ97568.1 Feature: domain Description: Cas_Cmr5 Location: 3482-3728 bp Feature: domain Description: Cas_Cmr5 Location: 3482-3728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701)

Seq: JGDX01000030.1 Bacteroides fragilis str. S23 R14 gbfS23R14.contig.29, whole genome shotgun sequence (193004 bp)
Overview 1 RT 1: 103512-112470 bp Neighborhood of RT #1 [103512, 112478] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103512-105701 bp Ori: EYA01371.1 Feature: domain Description: GlnA3 Location: 103587-105699 bp Feature: domain Description: GlnA3 Location: 103587-105699 bp Feature: gene Location: 106004-108160 bp Feature: gene Location: 108367-109479 bp Ori: EYA01514.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108682-109231 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108682 -1092 31 bp Feature: gene Location: 109621-111414 bp Ori: EYA01460.1 Feature: domain Description: rpsA Location: 109699-111307 bp Feature: domain Description: rpsA Location: 109699-111307 bp Feature: gene Location: 111564-112478 bp Ori: EYA01461.1 Gene: rnz Feature: domain Description: RNase_Z Location: 111579-112470 bp Feature: domain Description: RNase_Z Location: 111579-112 470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)