myRT

myRT report for GCA_000598685.2_ASM59868v2

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Seq: JGEA01000073.1 Bacteroides fragilis str. 1007-1-F #10 gbf10071F10.contig.72, whole genome shotgun sequence (97460 bp)
Overview 1 RT 1: 76110-81153 bp Neighborhood of RT #1 [76110, 81153] RVT-UG27 Feature: gene Location: 76110-76766 bp Feature: gene Location: 76810-77436 bp Feature: gene Location: 77454-78719 bp Ori: EYA11937.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 77643-78279 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 77643-78279 bp Feature: gene Location: 79589-80068 bp Feature: gene Location: 80065-81153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: JGEA01000023.1 Bacteroides fragilis str. 1007-1-F #10 gbf10071F10.contig.22, whole genome shotgun sequence (76349 bp)
Overview 1 RT 1: 38665-42271 bp Neighborhood of RT #1 [38665, 42312] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 38665-39075 bp Ori: EYA14518.1 Feature: domain Description: Cas_Cmr5 Location: 38713-38959 bp Feature: domain Description: Cas_Cmr5 Location: 38713-38959 bp Feature: gene Location: 39078-40022 bp Ori: EYA14519.1 Feature: domain Description: Cmr6_III-B Location: 39234-40011 bp Feature: domain Description: Cmr6_III-B Location: 392 34-40011 bp Feature: gene Location: 40042-42312 bp Ori: EYA14520.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 40249-40855 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 402 49-40855 bp Feature: domain Description: Cas1_I-II-III Location: 41314-42271 bp Feature: domain Description: Cas1_I-II-III Location: 41314-42 2 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JGEA01000015.1 Bacteroides fragilis str. 1007-1-F #10 gbf10071F10.contig.14, whole genome shotgun sequence (261573 bp)
Overview 1 RT 1: 26974-35932 bp 2 RT 2: 127303-130740 bp Neighborhood of RT #1 [26974, 35940] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [127303, 130740] RVT-DGRs Feature: gene Location: 26974-29163 bp Ori: EYA15505.1 Feature: domain Description: GlnA3 Location: 27049-29161 bp Feature: domain Description: GlnA3 Location: 27049-29161 bp Feature: gene Location: 29466-31622 bp Feature: gene Location: 31829-32941 bp Ori: EYA15507.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32144-32693 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 2144-3 2693 bp Feature: gene Location: 33083-34876 bp Ori: EYA15508.1 Feature: domain Description: rpsA Location: 33161-34769 bp Feature: domain Description: rpsA Location: 3 3 161-3 4769 bp Feature: gene Location: 35026-35940 bp Ori: EYA15509.1 Gene: rnz Feature: domain Description: RNase_Z Location: 35041-35932 bp Feature: domain Description: RNase_Z Location: 3 5041-3 593 2 bp Feature: gene Location: 127303-127569 bp Feature: gene Location: 127617-127994 bp Feature: gene Location: 127975-129015 bp Ori: EYA15590.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 128185-128809 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 128185-128809 bp Feature: gene Location: 129133-129282 bp Feature: gene Location: 129313-130740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), RVT-DGRs