myRT

myRT report for GCA_000598705.1_ASM59870v1

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Seq: JGED01000009.1 Bacteroides fragilis str. 1009-4-F #10 gbf10094F10.contig.8, whole genome shotgun sequence (304133 bp)
Overview 1 RT 1: 111406-120365 bp 2 RT 2: 275914-278738 bp Neighborhood of RT #1 [111406, 120373] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [275914, 278738] RVT-Retrons Feature: gene Location: 111406-113586 bp Ori: EYA30418.1 Feature: domain Description: GlnA3 Location: 111472-113584 bp Feature: domain Description: GlnA3 Location: 1 1 1 472-1 1 3584 bp Feature: gene Location: 113899-116055 bp Feature: gene Location: 116262-117374 bp Ori: EYA30420.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116577-117126 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 6577-1 1 71 26 bp Feature: gene Location: 117516-119309 bp Ori: EYA30421.1 Feature: domain Description: rpsA Location: 117594-119202 bp Feature: domain Description: rpsA Location: 1 1 7594-1 1 9202 bp Feature: gene Location: 119459-120373 bp Ori: EYA30422.1 Gene: rnz Feature: domain Description: RNase_Z Location: 119474-120365 bp Feature: domain Description: RNase_Z Location: 1 1 9474-1 20365 bp Feature: gene Location: 275914-276069 bp Feature: gene Location: 276197-276412 bp Feature: gene Location: 276437-277294 bp Ori: EYA30555.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 276599-277124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 276599-2771 24 bp Feature: gene Location: 277325-278200 bp Feature: gene Location: 278607-278738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGED01000029.1 Bacteroides fragilis str. 1009-4-F #10 gbf10094F10.contig.28, whole genome shotgun sequence (270264 bp)
Overview 1 RT 1: 129270-133830 bp Neighborhood of RT #1 [129270, 133830] NHL 7WD40 RVT-GII Feature: gene Location: 129270-130637 bp Feature: gene Location: 130634-131689 bp Ori: EYA27471.1 Feature: domain Description: NHL Location: 130856-131222 bp Feature: domain Description: NHL Location: 130856-1312 2 2 bp Feature: domain Description: 7WD40 Location: 131273-131654 bp Feature: domain Description: 7WD40 Location: 1312 73-131654 bp Feature: gene Location: 132701-132889 bp Ori: EYA27472.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132794-132863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 794-132 863 bp Feature: gene Location: 133550-133684 bp Feature: gene Location: 133693-133830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHL (pfam01436), 7WD40 (sd00039), RVT-GII