myRT

myRT report for GCA_000598865.1_ASM59886v1

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Seq: JGDT01000023.1 Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.22, whole genome shotgun sequence (93451 bp)
Overview 1 RT 1: 20323-29282 bp Neighborhood of RT #1 [20323, 29290] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 20323-22512 bp Feature: domain Description: GlnA3 Location: 20398-22510 bp Feature: domain Description: GlnA3 Location: 20398-2251 0 bp Feature: gene Location: 22816-24972 bp Feature: gene Location: 25179-26291 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25494-26043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 25494-26043 bp Feature: gene Location: 26433-28226 bp Feature: domain Description: rpsA Location: 26511-28119 bp Feature: domain Description: rpsA Location: 2651 1 -281 1 9 bp Feature: gene Location: 28376-29290 bp Feature: domain Description: RNase_Z Location: 28391-29282 bp Feature: domain Description: RNase_Z Location: 28391 -29282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGDT01000162.1 Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.163, whole genome shotgun sequence (551 bp)
Overview 1 RT 1: 4-550 bp Neighborhood of RT #1 [4, 551] RVT_N RVT-GII Feature: gene Location: 4-551 bp Feature: RT Description: RVT_N Location: 7-148 bp Feature: RT Description: RVT_N Location: 7-148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193-550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JGDT01000192.1 Bacteroides fragilis str. 3-F-2 #6 gbf3F26.contig.193, whole genome shotgun sequence (61634 bp)
Overview 1 RT 1: 30692-34488 bp Neighborhood of RT #1 [30692, 34488] RVT-DGRs Feature: gene Location: 30692-32011 bp Feature: gene Location: 32351-32470 bp Feature: gene Location: 32528-33343 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32846-33182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 2846-3 3 182 bp Feature: gene Location: 33487-34071 bp Feature: gene Location: 34093-34488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs