myRT

myRT report for GCA_000598905.1_ASM59890v1

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Seq: JGEF01000037.1 Bacteroides fragilis str. 20793-3 gbf207933.contig.36, whole genome shotgun sequence (193905 bp)
Overview 1 RT 1: 130654-135359 bp Neighborhood of RT #1 [130654, 135679] RVT-DGRs YhgE Feature: gene Location: 130654-130884 bp Feature: gene Location: 131061-131471 bp Feature: gene Location: 131485-132828 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 131692-132352 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 31 692-1 32352 bp Feature: gene Location: 133330-134766 bp Feature: gene Location: 134780-135679 bp Feature: domain Description: YhgE Location: 134966-135359 bp Feature: domain Description: YhgE Location: 1 34966-1 35359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, YhgE (COG1511)

Seq: JGEF01000136.1 Bacteroides fragilis str. 20793-3 gbf207933.contig.135, whole genome shotgun sequence (402 bp)
Overview 1 RT 1: 1-397 bp Neighborhood of RT #1 [1, 402] RVT-GII Feature: gene Location: 1-402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115-397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JGEF01000017.1 Bacteroides fragilis str. 20793-3 gbf207933.contig.16, whole genome shotgun sequence (197071 bp)
Overview 1 RT 1: 19137-28096 bp Neighborhood of RT #1 [19137, 28104] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 19137-21326 bp Feature: domain Description: GlnA3 Location: 19212-21324 bp Feature: domain Description: GlnA3 Location: 19212-213 24 bp Feature: gene Location: 21630-23786 bp Feature: gene Location: 23993-25105 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24308-24857 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 243 08-24857 bp Feature: gene Location: 25247-27040 bp Feature: domain Description: rpsA Location: 25325-26933 bp Feature: domain Description: rpsA Location: 253 25-2693 3 bp Feature: gene Location: 27190-28104 bp Feature: domain Description: RNase_Z Location: 27205-28096 bp Feature: domain Description: RNase_Z Location: 27205-28096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)