myRT

myRT report for GCA_000598985.1_ASM59898v1

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Seq: JGEK01000081.1 Bacteroides fragilis str. A7 (UDC12-2) gbfA7.contig.80, whole genome shotgun sequence (96288 bp)
Overview 1 RT 1: 25494-30000 bp Neighborhood of RT #1 [25494, 30000] NHL 7WD40 RVT-GII Feature: gene Location: 25494-26807 bp Feature: gene Location: 26816-27859 bp Ori: EYA59628.1 Feature: domain Description: NHL Location: 27026-27392 bp Feature: domain Description: NHL Location: 27026-27392 bp Feature: domain Description: 7WD40 Location: 27443-27824 bp Feature: domain Description: 7WD40 Location: 27443-27824 bp Feature: gene Location: 28871-29059 bp Ori: EYA59629.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28964-29033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28964-29033 bp Feature: gene Location: 29720-29854 bp Feature: gene Location: 29863-30000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHL (pfam01436), 7WD40 (sd00039), RVT-GII

Seq: JGEK01000051.1 Bacteroides fragilis str. A7 (UDC12-2) gbfA7.contig.50, whole genome shotgun sequence (189711 bp)
Overview 1 RT 1: 107755-116713 bp Neighborhood of RT #1 [107755, 116721] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 107755-109944 bp Ori: EYA62740.1 Feature: domain Description: GlnA3 Location: 107830-109942 bp Feature: domain Description: GlnA3 Location: 107830-109942 bp Feature: gene Location: 110247-112403 bp Feature: gene Location: 112610-113722 bp Ori: EYA62742.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112925-113474 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112 92 5-113474 bp Feature: gene Location: 113864-115657 bp Ori: EYA62743.1 Feature: domain Description: rpsA Location: 113942-115550 bp Feature: domain Description: rpsA Location: 113942 -115550 bp Feature: gene Location: 115807-116721 bp Ori: EYA62744.1 Gene: rnz Feature: domain Description: RNase_Z Location: 115822-116713 bp Feature: domain Description: RNase_Z Location: 11582 2 -116713 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)