myRT

myRT report for GCA_000599065.2_ASM59906v2

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Seq: JGEU01000034.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.33, whole genome shotgun sequence (1327911 bp)
Overview 1 RT 1: 847522-852948 bp 2 RT 2: 1326425-1327844 bp Neighborhood of RT #1 [847522, 853064] DUF772 RVT-CRISPR Cas1_I-II-III Cmr6_III-B Cas_Cmr5 Neighborhood of RT #2 [1326425, 1327911] RVT-DGRs Feature: gene Location: 847522-847677 bp Ori: EYB09926.1 Feature: domain Description: DUF772 Location: 847525-847669 bp Feature: domain Description: DUF772 Location: 847525-847669 bp Feature: gene Location: 848264-848377 bp Feature: gene Location: 849417-851687 bp Ori: EYB09928.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 849624-850230 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 849624-850230 bp Feature: domain Description: Cas1_I-II-III Location: 850689-851646 bp Feature: domain Description: Cas1 _I-II-III Location: 850689-851 646 bp Feature: gene Location: 851707-852651 bp Ori: EYB09929.1 Feature: domain Description: Cmr6_III-B Location: 851863-852640 bp Feature: domain Description: Cmr6_III-B Location: 851 863-852640 bp Feature: gene Location: 852654-853064 bp Ori: EYB09930.1 Feature: domain Description: Cas_Cmr5 Location: 852702-852948 bp Feature: domain Description: Cas_Cmr5 Location: 852702-852948 bp Feature: gene Location: 1326425-1326658 bp Feature: gene Location: 1326725-1326838 bp Feature: gene Location: 1327034-1327911 bp Ori: EYB10364.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1327247-1327844 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 327247-1 327844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT-CRISPR, Cas1_I-II-III (cl00656), Cmr6_III-B (cd09661), Cas_Cmr5 (pfam09701), RVT-DGRs

Seq: JGEU01000023.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.22, whole genome shotgun sequence (108084 bp)
Overview 1 RT 1: 76488-81531 bp Neighborhood of RT #1 [76488, 81531] RVT-UG27 Feature: gene Location: 76488-77144 bp Feature: gene Location: 77188-77814 bp Feature: gene Location: 77832-79097 bp Ori: EYB11980.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 78021-78657 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 7802 1-78657 bp Feature: gene Location: 79967-80446 bp Feature: gene Location: 80443-81531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: JGEU01000032.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.31, whole genome shotgun sequence (323539 bp)
Overview 1 RT 1: 103514-112472 bp Neighborhood of RT #1 [103514, 112480] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 103514-105703 bp Ori: EYB10604.1 Feature: domain Description: GlnA3 Location: 103589-105701 bp Feature: domain Description: GlnA3 Location: 103 589-105701 bp Feature: gene Location: 106006-108162 bp Feature: gene Location: 108369-109481 bp Ori: EYB10606.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108684-109233 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108684-10923 3 bp Feature: gene Location: 109623-111416 bp Ori: EYB10607.1 Feature: domain Description: rpsA Location: 109701-111309 bp Feature: domain Description: rpsA Location: 109701-1113 09 bp Feature: gene Location: 111566-112480 bp Ori: EYB10608.1 Gene: rnz Feature: domain Description: RNase_Z Location: 111581-112472 bp Feature: domain Description: RNase_Z Location: 111581-112472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGEU01000056.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.55, whole genome shotgun sequence (181572 bp)
Overview 1 RT 1: 44108-47757 bp Neighborhood of RT #1 [44108, 47757] RVT-DGRs Feature: gene Location: 44108-44488 bp Feature: gene Location: 44485-44913 bp Feature: gene Location: 44876-46063 bp Ori: EYB07384.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45209-45836 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 5209-4 5836 bp Feature: gene Location: 46185-46322 bp Feature: gene Location: 46396-47757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGEU01000001.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.0, whole genome shotgun sequence (1252 bp)
Overview 1 RT 1: 1-1249 bp Neighborhood of RT #1 [1, 1249] RVT-DGRs Feature: gene Location: 1-910 bp Ori: EYB12219.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-811 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 214-811 bp Feature: gene Location: 1106-1249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGEU01000010.1 Bacteroides fragilis str. 3783N1-6 gbf3783N16.contig.9, whole genome shotgun sequence (85353 bp)
Overview 1 RT 1: 7-2545 bp Neighborhood of RT #1 [7, 2545] RVT-DGRs Feature: gene Location: 7-120 bp Feature: gene Location: 316-1617 bp Ori: EYB12076.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1126 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 529-1126 bp Feature: gene Location: 1614-2099 bp Feature: gene Location: 2360-2545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs