myRT

myRT report for GCA_000599265.1_ASM59926v1

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Seq: JGEB01000075.1 Bacteroides fragilis str. 1007-1-F #3 gbf10071F3.contig.74, whole genome shotgun sequence (705178 bp)
Overview 1 RT 1: 667612-671218 bp Neighborhood of RT #1 [667612, 671259] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 667612-668022 bp Ori: EYA19492.1 Feature: domain Description: Cas_Cmr5 Location: 667660-667906 bp Feature: domain Description: Cas_Cmr5 Location: 667660-667906 bp Feature: gene Location: 668025-668969 bp Ori: EYA19493.1 Feature: domain Description: Cmr6_III-B Location: 668181-668958 bp Feature: domain Description: Cmr6_III-B Location: 6681 81 -668958 bp Feature: gene Location: 668989-671259 bp Ori: EYA19494.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 669196-669802 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 6691 96-669802 bp Feature: domain Description: Cas1_I-II-III Location: 670261-671218 bp Feature: domain Description: Cas1 _I-II-III Location: 670261 -671 21 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JGEB01000065.1 Bacteroides fragilis str. 1007-1-F #3 gbf10071F3.contig.64, whole genome shotgun sequence (401371 bp)
Overview 1 RT 1: 26974-35932 bp 2 RT 2: 127303-130740 bp Neighborhood of RT #1 [26974, 35940] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [127303, 130740] RVT-DGRs Feature: gene Location: 26974-29163 bp Ori: EYA20185.1 Feature: domain Description: GlnA3 Location: 27049-29161 bp Feature: domain Description: GlnA3 Location: 2 7049-2 9161 bp Feature: gene Location: 29403-31622 bp Feature: gene Location: 31829-32941 bp Ori: EYA20187.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32144-32693 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 144-32 693 bp Feature: gene Location: 33083-34876 bp Ori: EYA20188.1 Feature: domain Description: rpsA Location: 33161-34769 bp Feature: domain Description: rpsA Location: 33161-34769 bp Feature: gene Location: 35026-35940 bp Ori: EYA20189.1 Gene: rnz Feature: domain Description: RNase_Z Location: 35041-35932 bp Feature: domain Description: RNase_Z Location: 35041-35932 bp Feature: gene Location: 127303-127569 bp Feature: gene Location: 127617-127994 bp Feature: gene Location: 127975-129015 bp Ori: EYA20271.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 128185-128809 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 8185-12 8809 bp Feature: gene Location: 129133-129282 bp Feature: gene Location: 129313-130740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), RVT-DGRs

Seq: JGEB01000016.1 Bacteroides fragilis str. 1007-1-F #3 gbf10071F3.contig.15, whole genome shotgun sequence (96372 bp)
Overview 1 RT 1: 75022-80065 bp Neighborhood of RT #1 [75022, 80065] RVT-UG27 Feature: gene Location: 75022-75678 bp Feature: gene Location: 75722-76348 bp Feature: gene Location: 76366-77631 bp Ori: EYA21933.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 76555-77191 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 76555-77191 bp Feature: gene Location: 78501-78980 bp Feature: gene Location: 78977-80065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27