myRT

myRT report for GCA_000600315.1_Newbler2.5.3

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Seq: KK088293.1 Bacillus thuringiensis strain NBIN-866 genomic scaffold scaffold139, whole genome shotgun sequence (5373 bp)
Overview 1 RT 1: 876-5051 bp Neighborhood of RT #1 [876, 5051] RVT-GII GIIM TraG-D_C Ftsk_gamma Feature: gene Location: 876-2750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1176-1881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 76-1 881 bp Feature: domain Description: GIIM Note: maturase Location: 1995-2163 bp Feature: domain Description: GIIM Note: maturase Location: 1 995-21 63 bp Feature: gene Location: 2983-4665 bp Feature: domain Description: TraG-D_C Location: 2995-3313 bp Feature: domain Description: TraG-D_C Location: 2995-331 3 bp Feature: domain Description: Ftsk_gamma Location: 3718-3898 bp Feature: domain Description: Ftsk_gamma Location: 371 8-3898 bp Feature: gene Location: 4824-5051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388)

Seq: KK088252.1 Bacillus thuringiensis strain NBIN-866 genomic scaffold scaffold101, whole genome shotgun sequence (14709 bp)
Overview 1 RT 1: 4080-7460 bp Neighborhood of RT #1 [4080, 7474] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 4080-4466 bp Feature: gene Location: 4773-5189 bp Feature: gene Location: 5306-6613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5591-6230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5591-62 30 bp Feature: domain Description: GIIM Note: maturase Location: 6305-6530 bp Feature: domain Description: GIIM Note: maturase Location: 6305-6530 bp Feature: gene Location: 6787-6966 bp Feature: gene Location: 7118-7474 bp Feature: domain Description: DDE_Tnp_1 Location: 7274-7460 bp Feature: domain Description: DDE_Tnp_1 Location: 72 74-7460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: KK088396.1 Bacillus thuringiensis strain NBIN-866 genomic scaffold scaffold86, whole genome shotgun sequence (18038 bp)
Overview 1 RT 1: 6104-11290 bp Neighborhood of RT #1 [6104, 11290] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6104-7939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6371-7202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 71-7202 bp Feature: domain Description: Intron_maturas2 Location: 7271-7646 bp Feature: domain Description: Intron_maturas2 Location: 7271-7646 bp Feature: domain Description: HNHc Note: nucleases Location: 7739-7886 bp Feature: domain Description: HNHc Note: nucleases Location: 773 9-7886 bp Feature: gene Location: 9612-10325 bp Feature: gene Location: 10661-11290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: KK088403.1 Bacillus thuringiensis strain NBIN-866 genomic scaffold scaffold92, whole genome shotgun sequence (16570 bp)
Overview 1 RT 1: 8725-15365 bp Neighborhood of RT #1 [8725, 15365] NT_KNTase_like RVT-GII Feature: gene Location: 8725-9102 bp Feature: domain Description: NT_KNTase_like Location: 8800-9100 bp Feature: domain Description: NT_KNTase_like Location: 8800-9100 bp Feature: gene Location: 10112-10315 bp Feature: gene Location: 10312-12243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10633-11368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10633-11368 bp Feature: gene Location: 12837-13246 bp Feature: gene Location: 14909-15365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KK088254.1 Bacillus thuringiensis strain NBIN-866 genomic scaffold scaffold103, whole genome shotgun sequence (14563 bp)
Overview 1 RT 1: 6997-13715 bp Neighborhood of RT #1 [6997, 13726] MgtE RimL RVT-GII Intron_maturas2 HNHc Lysozyme_like YxeA Feature: gene Location: 6997-8325 bp Feature: domain Description: MgtE Location: 7012-8317 bp Feature: domain Description: MgtE Location: 7012-8317 bp Feature: gene Location: 8960-9466 bp Feature: domain Description: RimL Location: 8969-9464 bp Feature: domain Description: RimL Location: 8969-9464 bp Feature: gene Location: 9963-11786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10227-11061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10227-11061 bp Feature: domain Description: Intron_maturas2 Location: 11130-11469 bp Feature: domain Description: Intron_maturas2 Location: 11130-11469 bp Feature: domain Description: HNHc Note: nucleases Location: 11607-11763 bp Feature: domain Description: HNHc Note: nucleases Location: 11607-11763 bp Feature: gene Location: 12362-12943 bp Feature: domain Description: Lysozyme_like Location: 12497-12932 bp Feature: domain Description: Lysozyme_like Location: 12497-12932 bp Feature: gene Location: 13370-13726 bp Feature: domain Description: YxeA Location: 13409-13715 bp Feature: domain Description: YxeA Location: 13409-13715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), YxeA (COG5294), MgtE (pfam01769), RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)