myRT

myRT report for GCA_000601015.1_ASM60101v1

Download annotations/find similar RTs

Seq: JGVC01000124.1 Bacteroides fragilis str. S6L5 gbfS6L5.contig.142, whole genome shotgun sequence (168606 bp)
Overview 1 RT 1: 97318-106276 bp Neighborhood of RT #1 [97318, 106284] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 97318-99507 bp Feature: domain Description: GlnA3 Location: 97393-99505 bp Feature: domain Description: GlnA3 Location: 97393-99505 bp Feature: gene Location: 99810-101966 bp Feature: gene Location: 102173-103285 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 102488-103037 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 02488-1 03037 bp Feature: gene Location: 103427-105220 bp Feature: domain Description: rpsA Location: 103505-105113 bp Feature: domain Description: rpsA Location: 1 03505-1 051 1 3 bp Feature: gene Location: 105370-106284 bp Feature: domain Description: RNase_Z Location: 105385-106276 bp Feature: domain Description: RNase_Z Location: 1 05385-1 06276 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGVC01000147.1 Bacteroides fragilis str. S6L5 gbfS6L5.contig.166, whole genome shotgun sequence (96955 bp)
Overview 1 RT 1: 61630-66780 bp 2 RT 2: 88886-96793 bp Neighborhood of RT #1 [61630, 66848] MPTase-PolyVal RVT-GII Intron_maturas2 DUF1738 SSB_OBF SSB_OBF Neighborhood of RT #2 [88886, 96793] PRK06917 N6_Mtase COG4646 RVT_N RVT-GII GIIM TssC Feature: gene Location: 61630-62001 bp Feature: gene Location: 62056-63399 bp Feature: domain Description: MPTase-PolyVal Location: 62353-62665 bp Feature: domain Description: MPTase-PolyVal Location: 62 353-62 665 bp Feature: gene Location: 63662-65467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63926-64748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6392 6-64748 bp Feature: domain Description: Intron_maturas2 Location: 64922-65147 bp Feature: domain Description: Intron_maturas2 Location: 6492 2 -65147 bp Feature: gene Location: 66013-66231 bp Feature: domain Description: DUF1738 Location: 66067-66217 bp Feature: domain Description: DUF1738 Location: 66067-662 17 bp Feature: gene Location: 66237-66848 bp Feature: domain Description: SSB_OBF Location: 66255-66462 bp Feature: domain Description: SSB_OBF Location: 662 55-66462 bp Feature: domain Description: SSB_OBF Location: 66561-66780 bp Feature: domain Description: SSB_OBF Location: 66561-66780 bp Feature: gene Location: 88886-89032 bp Feature: gene Location: 89036-93073 bp Feature: domain Description: PRK06917 Location: 89075-89297 bp Feature: domain Description: PRK06917 Location: 89075-892 97 bp Feature: domain Description: N6_Mtase Location: 89528-89942 bp Feature: domain Description: N6_Mtase Location: 8952 8-89942 bp Feature: domain Description: COG4646 Location: 90725-92456 bp Feature: domain Description: COG4646 Location: 9072 5-92 456 bp Feature: gene Location: 93731-95275 bp Feature: RT Description: RVT_N Location: 93785-94028 bp Feature: RT Description: RVT_N Location: 93785-9402 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94073-94721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94073-9472 1 bp Feature: domain Description: GIIM Note: maturase Location: 94775-95006 bp Feature: domain Description: GIIM Note: maturase Location: 94775-95006 bp Feature: gene Location: 95308-96066 bp Feature: domain Description: TssC Location: 95311-96061 bp Feature: domain Description: TssC Location: 95311-96061 bp Feature: gene Location: 96179-96793 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGVC01000024.1 Bacteroides fragilis str. S6L5 gbfS6L5.contig.28, whole genome shotgun sequence (1331 bp)
Overview 1 RT 1: 1-1331 bp Neighborhood of RT #1 [1, 1331] RVT-CRISPR-like Feature: gene Location: 1-1118 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 208-814 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 208-814 bp Feature: gene Location: 1138-1331 bp Sorry, your browser does not support inline SVG.
Associated domains: