myRT

myRT report for GCA_000601035.1_ASM60103v1

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Seq: JGVD01000023.1 Bacteroides fragilis str. 1007-1-F #5 gbf10071F5.contig.22, whole genome shotgun sequence (61816 bp)
Overview 1 RT 1: 16105-25063 bp Neighborhood of RT #1 [16105, 25071] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 16105-18294 bp Ori: EYE59007.1 Feature: domain Description: GlnA3 Location: 16180-18292 bp Feature: domain Description: GlnA3 Location: 1 61 80-1 8292 bp Feature: gene Location: 18597-20753 bp Feature: gene Location: 20960-22072 bp Ori: EYE59009.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21275-21824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 275-21 824 bp Feature: gene Location: 22214-24007 bp Ori: EYE59010.1 Feature: domain Description: rpsA Location: 22292-23900 bp Feature: domain Description: rpsA Location: 22292-23900 bp Feature: gene Location: 24157-25071 bp Ori: EYE59011.1 Gene: rnz Feature: domain Description: RNase_Z Location: 24172-25063 bp Feature: domain Description: RNase_Z Location: 241 72-25063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JGVD01000059.1 Bacteroides fragilis str. 1007-1-F #5 gbf10071F5.contig.59, whole genome shotgun sequence (31902 bp)
Overview 1 RT 1: 4438-8044 bp Neighborhood of RT #1 [4438, 8085] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 4438-4848 bp Ori: EYE53623.1 Feature: domain Description: Cas_Cmr5 Location: 4486-4732 bp Feature: domain Description: Cas_Cmr5 Location: 4486-4732 bp Feature: gene Location: 4851-5795 bp Ori: EYE53624.1 Feature: domain Description: Cmr6_III-B Location: 5007-5784 bp Feature: domain Description: Cmr6_III-B Location: 5007-5784 bp Feature: gene Location: 5815-8085 bp Ori: EYE53625.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 6022-6628 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 602 2 -662 8 bp Feature: domain Description: Cas1_I-II-III Location: 7087-8044 bp Feature: domain Description: Cas1_I-II-III Location: 7087-8044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JGVD01000025.1 Bacteroides fragilis str. 1007-1-F #5 gbf10071F5.contig.24, whole genome shotgun sequence (32396 bp)
Overview 1 RT 1: 15789-19226 bp Neighborhood of RT #1 [15789, 19226] RVT-DGRs Feature: gene Location: 15789-16103 bp Feature: gene Location: 16103-16480 bp Feature: gene Location: 16461-17501 bp Ori: EYE58949.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16671-17295 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16671-17295 bp Feature: gene Location: 17619-17768 bp Feature: gene Location: 17799-19226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: JGVD01000122.1 Bacteroides fragilis str. 1007-1-F #5 gbf10071F5.contig.125, whole genome shotgun sequence (97460 bp)
Overview 1 RT 1: 17393-21351 bp Neighborhood of RT #1 [17393, 21351] RVT-UG27 Feature: gene Location: 17393-17872 bp Feature: gene Location: 18424-18585 bp Feature: gene Location: 18742-20007 bp Ori: EYE46305.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 18931-19567 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 18931-19567 bp Feature: gene Location: 20025-20651 bp Feature: gene Location: 20695-21351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27