myRT

myRT report for GCA_000601055.1_ASM60105v1

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Seq: JHEF01000027.1 Bacteroides fragilis str. S23L17 gbfS23L17.contig.26, whole genome shotgun sequence (82871 bp)
Overview 1 RT 1: 54845-58451 bp Neighborhood of RT #1 [54845, 58492] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Feature: gene Location: 54845-55255 bp Ori: EYE44674.1 Feature: domain Description: Cas_Cmr5 Location: 54893-55139 bp Feature: domain Description: Cas_Cmr5 Location: 54893-551 39 bp Feature: gene Location: 55258-56202 bp Ori: EYE44675.1 Feature: domain Description: Cmr6_III-B Location: 55414-56191 bp Feature: domain Description: Cmr6_III-B Location: 5541 4-561 91 bp Feature: gene Location: 56222-58492 bp Ori: EYE44676.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 56429-57035 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 56429-57035 bp Feature: domain Description: Cas1_I-II-III Location: 57494-58451 bp Feature: domain Description: Cas1 _I-II-III Location: 57494-58451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JHEF01000077.1 Bacteroides fragilis str. S23L17 gbfS23L17.contig.76, whole genome shotgun sequence (5141 bp)
Overview 1 RT 1: 522-5141 bp Neighborhood of RT #1 [522, 5141] HimA RVT-UNC GIIM Feature: gene Location: 522-914 bp Ori: EYE41386.1 Feature: domain Description: HimA Location: 546-714 bp Feature: domain Description: HimA Location: 546-714 bp Feature: gene Location: 1024-1218 bp Feature: gene Location: 1606-2769 bp Ori: EYE41388.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 1777-2257 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1777-2 2 57 bp Feature: domain Description: GIIM Note: maturase Location: 2296-2473 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 96-2 473 bp Feature: gene Location: 2897-3028 bp Feature: gene Location: 3046-5141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HimA (COG0776), RVT-UG17/RVT-DGRs/RVT-CRISPR/RVT-GII(RVT-UNC), GIIM (pfam08388)

Seq: JHEF01000079.1 Bacteroides fragilis str. S23L17 gbfS23L17.contig.78, whole genome shotgun sequence (3381 bp)
Overview 1 RT 1: 1-3217 bp Neighborhood of RT #1 [1, 3381] RVT-UNC GIIM Feature: gene Location: 1-2072 bp Feature: gene Location: 2121-2381 bp Feature: gene Location: 2350-3381 bp Ori: EYE41383.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 2521-3001 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2521-3 001 bp Feature: domain Description: GIIM Note: maturase Location: 3040-3217 bp Feature: domain Description: GIIM Note: maturase Location: 3 040-3 217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17/RVT-DGRs/RVT-CRISPR/RVT-GII(RVT-UNC), GIIM (pfam08388)

Seq: JHEF01000012.1 Bacteroides fragilis str. S23L17 gbfS23L17.contig.11, whole genome shotgun sequence (193199 bp)
Overview 1 RT 1: 105739-112468 bp Neighborhood of RT #1 [105739, 112476] RVT-Retrons rpsA RNase_Z Feature: gene Location: 105739-105879 bp Feature: gene Location: 106002-108158 bp Feature: gene Location: 108365-109477 bp Ori: EYE47046.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108680-109229 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108680-109229 bp Feature: gene Location: 109619-111412 bp Ori: EYE47047.1 Feature: domain Description: rpsA Location: 109697-111305 bp Feature: domain Description: rpsA Location: 109697-111305 bp Feature: gene Location: 111562-112476 bp Ori: EYE47048.1 Gene: rnz Feature: domain Description: RNase_Z Location: 111577-112468 bp Feature: domain Description: RNase_Z Location: 111577-1124 68 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)