myRT

myRT report for GCA_000613345.1_ASM61334v1

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Seq: BAIS01000150.1 Prevotella disiens JCM 6334 = ATCC 29426 DNA, contig: JCM6334.contig00150, whole genome shotgun sequence (1218 bp)
Overview 1 RT 1: 1-1207 bp Neighborhood of RT #1 [1, 1215] RVT-GII Intron_maturas2 Feature: gene Location: 1-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112-934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 2-934 bp Feature: domain Description: Intron_maturas2 Location: 1003-1207 bp Feature: domain Description: Intron_maturas2 Location: 1 003-1 207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BAIS01000149.1 Prevotella disiens JCM 6334 = ATCC 29426 DNA, contig: JCM6334.contig00149, whole genome shotgun sequence (1217 bp)
Overview 1 RT 1: 3-936 bp Neighborhood of RT #1 [3, 1214] RVT-GII Feature: gene Location: 3-1214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BAIS01000056.1 Prevotella disiens JCM 6334 = ATCC 29426 DNA, contig: JCM6334.contig00056, whole genome shotgun sequence (14934 bp)
Overview 1 RT 1: 2-2698 bp Neighborhood of RT #1 [2, 2889] RVT-GII RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 2-172 bp Feature: gene Location: 433-1113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 634-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 4-1084 bp Feature: gene Location: 1116-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122-1248 bp Feature: domain Description: GIIM Note: maturase Location: 1308-1539 bp Feature: domain Description: GIIM Note: maturase Location: 13 08-153 9 bp Feature: gene Location: 1878-2303 bp Feature: gene Location: 2416-2889 bp Feature: domain Description: DDE_Tnp_1 Location: 2476-2698 bp Feature: domain Description: DDE_Tnp_1 Location: 2476-2698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BAIS01000004.1 Prevotella disiens JCM 6334 = ATCC 29426 DNA, contig: JCM6334.contig00004, whole genome shotgun sequence (96647 bp)
Overview 1 RT 1: 2224-6249 bp Neighborhood of RT #1 [2224, 6323] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like KOG4768 RVT-GII Intron_maturas2 COG3943 Feature: gene Location: 2224-3393 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2254-2509 bp Feature: domain Description: Arm-DNA-bind_5 Location: 2254 -2509 bp Feature: domain Description: Phage_int_SAM_5 Location: 2548-2869 bp Feature: domain Description: Phage_int_SAM_5 Location: 254 8-2869 bp Feature: domain Description: INTN1_C_like Location: 2908-3376 bp Feature: domain Description: INTN1_C_like Location: 2908-3376 bp Feature: gene Location: 3940-4260 bp Feature: domain Description: KOG4768 Location: 3973-4192 bp Feature: domain Description: KOG4 768 Location: 3973-4 192 bp Feature: gene Location: 4278-5747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4284-5025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 284 -5025 bp Feature: domain Description: Intron_maturas2 Location: 5136-5406 bp Feature: domain Description: Intron_maturas2 Location: 5136-54 06 bp Feature: gene Location: 5749-5949 bp Feature: gene Location: 5961-6323 bp Feature: domain Description: COG3943 Location: 6000-6249 bp Feature: domain Description: COG394 3 Location: 6000-624 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348), COG3943 (Uncharacterized conserved protein )