myRT

myRT report for GCA_000613545.1_ASM61354v1

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Seq: BAJE01000123.1 Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 DNA, contig: JCM13223.contig00123, whole genome shotgun sequence (2489 bp)
Overview 1 RT 1: 115-2486 bp Neighborhood of RT #1 [115, 2486] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 115-1950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1 231 bp Feature: domain Description: Intron_maturas2 Location: 1390-1759 bp Feature: domain Description: Intron_maturas2 Location: 1 390-1 759 bp Feature: domain Description: HNHc Note: nucleases Location: 1783-1924 bp Feature: domain Description: HNHc Note: nucleases Location: 1 783-1 924 bp Feature: gene Location: 2316-2486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BAJE01000038.1 Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 DNA, contig: JCM13223.contig00038, whole genome shotgun sequence (40379 bp)
Overview 1 RT 1: 37769-40377 bp Neighborhood of RT #1 [37769, 40377] Gp49 HTH_XRE RVT-DGRs Feature: gene Location: 37769-38113 bp Feature: domain Description: Gp49 Location: 37823-38081 bp Feature: domain Description: Gp49 Location: 3782 3-38081 bp Feature: gene Location: 38118-38429 bp Feature: domain Description: HTH_XRE Location: 38232-38385 bp Feature: domain Description: HTH_XRE Location: 382 32 -38385 bp Feature: gene Location: 38676-40166 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39063-39753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39063-39753 bp Feature: gene Location: 40234-40377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gp49 (pfam05973), HTH_XRE (smart00530), RVT-DGRs

Seq: BAJE01000035.1 Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 DNA, contig: JCM13223.contig00035, whole genome shotgun sequence (41727 bp)
Overview 1 RT 1: 1446-7003 bp Neighborhood of RT #1 [1446, 7074] RVT-DGRs RVT-DGRs Dam Feature: gene Location: 1446-2345 bp Feature: gene Location: 2359-3795 bp Feature: gene Location: 4155-4889 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4491-4800 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4491-4800 bp Feature: gene Location: 4886-5626 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4889-5150 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4889-5150 bp Feature: gene Location: 5640-6050 bp Feature: gene Location: 6232-7074 bp Feature: domain Description: Dam Location: 6235-7003 bp Feature: domain Description: Dam Location: 623 5-7003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)

Seq: BAJE01000005.1 Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 DNA, contig: JCM13223.contig00005, whole genome shotgun sequence (149770 bp)
Overview 1 RT 1: 95573-98752 bp Neighborhood of RT #1 [95573, 98752] RVT-DGRs Feature: gene Location: 95573-96028 bp Feature: gene Location: 96272-96442 bp Feature: gene Location: 96544-97848 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96754-97432 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 96754 -974 32 bp Feature: gene Location: 97845-98330 bp Feature: gene Location: 98510-98752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs