myRT

myRT report for GCA_000613665.1_ASM61366v1

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Seq: BAJK01000019.1 Bacteroides gallinarum DSM 18171 = JCM 13658 DNA, contig: JCM13658.contig00019, whole genome shotgun sequence (73943 bp)
Overview 1 RT 1: 53341-59327 bp Neighborhood of RT #1 [53341, 59327] Relaxase Relaxase YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 53341-54591 bp Feature: domain Description: Relaxase Location: 53503-53824 bp Feature: domain Description: Relaxase Location: 53503-53824 bp Feature: domain Description: Relaxase Location: 54151-54385 bp Feature: domain Description: Relaxase Location: 541 51 -54385 bp Feature: gene Location: 54625-55788 bp Feature: domain Description: YWFCY Location: 54631-54808 bp Feature: domain Description: YWFCY Location: 54631 -54808 bp Feature: gene Location: 56350-58167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56617-57439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5661 7-57439 bp Feature: domain Description: Intron_maturas2 Location: 57511-57817 bp Feature: domain Description: Intron_maturas2 Location: 5751 1 -5781 7 bp Feature: domain Description: HNHc Note: nucleases Location: 57988-58141 bp Feature: domain Description: HNHc Note: nucleases Location: 57988-581 41 bp Feature: gene Location: 58131-59153 bp Feature: domain Description: TraG-D_C Location: 58509-58842 bp Feature: domain Description: TraG-D_C Location: 58509-58842 bp Feature: gene Location: 59160-59327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: BAJK01000011.1 Bacteroides gallinarum DSM 18171 = JCM 13658 DNA, contig: JCM13658.contig00011, whole genome shotgun sequence (102841 bp)
Overview 1 RT 1: 95935-101122 bp Neighborhood of RT #1 [95935, 101122] SSB_OBF SSB_OBF DUF1738 RVT-GII RVT-GII Intron_maturas2 HNHc MPTase-PolyVal Feature: gene Location: 95935-96549 bp Feature: domain Description: SSB_OBF Location: 95953-96154 bp Feature: domain Description: SSB_OBF Location: 95953-96154 bp Feature: domain Description: SSB_OBF Location: 96262-96424 bp Feature: domain Description: SSB_OBF Location: 962 62 -9642 4 bp Feature: gene Location: 96555-96950 bp Feature: domain Description: DUF1738 Location: 96609-96924 bp Feature: domain Description: DUF1738 Location: 96609-9692 4 bp Feature: gene Location: 97487-97909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97751-97877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97751-97877 bp Feature: gene Location: 97996-99294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97999-98572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97999-98572 bp Feature: domain Description: Intron_maturas2 Location: 98641-98953 bp Feature: domain Description: Intron_maturas2 Location: 98641-98953 bp Feature: domain Description: HNHc Note: nucleases Location: 99124-99277 bp Feature: domain Description: HNHc Note: nucleases Location: 9912 4-992 77 bp Feature: gene Location: 99394-100542 bp Feature: domain Description: MPTase-PolyVal Location: 99709-100021 bp Feature: domain Description: MPTase-PolyVal Location: 99709-10002 1 bp Feature: gene Location: 100721-101122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SSB_OBF (cd04496), DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), MPTase-PolyVal (pfam18818)

Seq: BAJK01000008.1 Bacteroides gallinarum DSM 18171 = JCM 13658 DNA, contig: JCM13658.contig00008, whole genome shotgun sequence (115948 bp)
Overview 1 RT 1: 86876-89723 bp Neighborhood of RT #1 [86876, 89723] RVT-UG27 Feature: gene Location: 86876-87121 bp Feature: gene Location: 87156-87812 bp Feature: gene Location: 87853-89190 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 88120-88756 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 88120-88756 bp Feature: gene Location: 89236-89403 bp Feature: gene Location: 89472-89723 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: BAJK01000001.1 Bacteroides gallinarum DSM 18171 = JCM 13658 DNA, contig: JCM13658.contig00001, whole genome shotgun sequence (330270 bp)
Overview 1 RT 1: 159004-162402 bp Neighborhood of RT #1 [159004, 162402] RVT-UG27 RVT-UG27 Feature: gene Location: 159004-159630 bp Feature: gene Location: 159664-160332 bp Feature: gene Location: 160325-160825 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 160517-160823 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 160517-160823 bp Feature: gene Location: 160882-161469 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 160885-161152 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 160885-161152 bp Feature: gene Location: 161507-161659 bp Feature: gene Location: 161905-162402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27