myRT

myRT report for GCA_000613825.1_ASM61382v1

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Seq: BAJS01000005.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 DNA, contig: JCM15093.contig00005, whole genome shotgun sequence (181270 bp)
Overview 1 RT 1: 176666-180160 bp Neighborhood of RT #1 [176666, 180174] purE SUA5 RVT-GII GIIM HTH_38 COG3464 Feature: gene Location: 176666-177121 bp Ori: GAK36257.1 Feature: domain Description: purE Location: 176669-177104 bp Feature: domain Description: purE Location: 1 76669-1 771 04 bp Feature: gene Location: 177111-178073 bp Ori: GAK36258.1 Feature: domain Description: SUA5 Location: 177120-177702 bp Feature: domain Description: SUA5 Location: 1 771 20-1 77702 bp Feature: gene Location: 178348-179385 bp Ori: GAK36259.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178381-178936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 78381 -1 78936 bp Feature: domain Description: GIIM Note: maturase Location: 179008-179233 bp Feature: domain Description: GIIM Note: maturase Location: 1 79008-1 79233 bp Feature: gene Location: 179398-180174 bp Ori: GAK36260.1 Feature: domain Description: HTH_38 Location: 179407-179488 bp Feature: domain Description: HTH_38 Location: 1 79407-1 79488 bp Feature: domain Description: COG3464 Location: 179881-180160 bp Feature: domain Description: COG3464 Location: 1 79881 -1 801 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT purE (TIGR01162), SUA5 (pfam03481), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), COG3464 (Transposase )

Seq: BAJS01000029.1 Bacteroides graminisolvens DSM 19988 = JCM 15093 DNA, contig: JCM15093.contig00029, whole genome shotgun sequence (39499 bp)
Overview 1 RT 1: 21404-25823 bp Neighborhood of RT #1 [21404, 25823] RVT-UG27 Feature: gene Location: 21404-21781 bp Feature: gene Location: 21804-22016 bp Feature: gene Location: 23149-24423 bp Ori: GAK37813.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 23347-23983 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 3347-2 3983 bp Feature: gene Location: 24481-24816 bp Feature: gene Location: 24846-25823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27