myRT

myRT report for GCA_000614895.1_ASM61489v1

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Seq: BALK01000090.1 Marinilabilia salmonicolor JCM 21150 DNA, contig: JCM21150.contig00090, whole genome shotgun sequence (1289 bp)
Overview 1 RT 1: 87-1077 bp Neighborhood of RT #1 [87, 1286] RVT-GII GIIM Feature: gene Location: 87-1286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177-792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77-792 bp Feature: domain Description: GIIM Note: maturase Location: 864-1077 bp Feature: domain Description: GIIM Note: maturase Location: 864-1 077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BALK01000061.1 Marinilabilia salmonicolor JCM 21150 DNA, contig: JCM21150.contig00061, whole genome shotgun sequence (17350 bp)
Overview 1 RT 1: 3234-8564 bp Neighborhood of RT #1 [3234, 8569] RVT_N RVT-GII GIIM OMP_RagA_SusC Big_7 PKD Fib_succ_major Feature: gene Location: 3234-3446 bp Feature: gene Location: 3737-3949 bp Feature: gene Location: 3980-5359 bp Feature: RT Description: RVT_N Location: 3986-4121 bp Feature: RT Description: RVT_N Location: 3986-412 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4166-4793 bp Feature: domain Description: GIIM Note: maturase Location: 4847-5081 bp Feature: domain Description: GIIM Note: maturase Location: 4847-5081 bp Feature: gene Location: 5463-6482 bp Feature: domain Description: OMP_RagA_SusC Location: 5505-5727 bp Feature: domain Description: OMP_RagA_SusC Location: 5505-572 7 bp Feature: gene Location: 7262-8569 bp Feature: domain Description: Big_7 Location: 7364-7568 bp Feature: domain Description: Big_7 Location: 7364-7568 bp Feature: domain Description: PKD Location: 7685-7841 bp Feature: domain Description: PKD Location: 7685-7841 bp Feature: domain Description: Fib_succ_major Location: 7931-8564 bp Feature: domain Description: Fib_succ_major Location: 7931-8564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), OMP_RagA_SusC (TIGR04056), Big_7 (pfam17957), PKD (smart00089), Fib_succ_major (TIGR02145)

Seq: BALK01000058.1 Marinilabilia salmonicolor JCM 21150 DNA, contig: JCM21150.contig00058, whole genome shotgun sequence (22654 bp)
Overview 1 RT 1: 17897-22321 bp Neighborhood of RT #1 [17897, 22482] HSDR_N met_A_Alw26 met_A_Alw26 RVT-Retrons Feature: gene Location: 17897-20701 bp Feature: domain Description: HSDR_N Location: 17987-18326 bp Feature: domain Description: HSDR_N Location: 17987-183 26 bp Feature: domain Description: met_A_Alw26 Location: 18974-19583 bp Feature: domain Description: met_A_Alw26 Location: 18974-19583 bp Feature: domain Description: met_A_Alw26 Location: 19595-20618 bp Feature: domain Description: met_A_Alw26 Location: 19595-20618 bp Feature: gene Location: 21084-21329 bp Feature: gene Location: 21667-22482 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21796-22321 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21796-223 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HSDR_N (pfam04313), met_A_Alw26 (TIGR02987), RVT-Retrons