myRT

myRT report for GCA_000615505.1_Ec2010C-3840

Download annotations/find similar RTs

Seq: JHFK01000135.1 Escherichia coli O121:H19 str. 2010C-3840 contig135, whole genome shotgun sequence (125273 bp)
Overview 1 RT 1: 113558-119433 bp Neighborhood of RT #1 [113558, 119561] DUF932 RVT-GII Intron_maturas2 HNHc Pat_hypo_Ecoli_Z1214_like Feature: gene Location: 113558-113803 bp Feature: gene Location: 113803-114216 bp Feature: domain Description: DUF932 Location: 113806-114181 bp Feature: domain Description: DUF932 Location: 1 1 3806-1 1 41 81 bp Feature: gene Location: 114362-116140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114623-115418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 4623-1 1 541 8 bp Feature: domain Description: Intron_maturas2 Location: 115544-115769 bp Feature: domain Description: Intron_maturas2 Location: 1 1 5544-1 1 5769 bp Feature: domain Description: HNHc Note: nucleases Location: 115964-116114 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 5964-1 1 61 1 4 bp Feature: gene Location: 117253-117663 bp Feature: gene Location: 118491-119561 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 118518-119433 bp Feature: domain Description: Pat_hypo_Ecoli_Z1 21 4_like Location: 1 1 851 8-1 1 9433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Pat_hypo_Ecoli_Z1214_like (cd07209)