myRT

myRT report for GCA_000616135.2_Ec2011C-3216

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Seq: JHLZ01000116.1 Escherichia coli O121:H19 str. 2011C-3216 contig116, whole genome shotgun sequence (12311 bp)
Overview 1 RT 1: 976-6851 bp Neighborhood of RT #1 [976, 6979] DUF932 RVT-GII Intron_maturas2 HNHc Pat_hypo_Ecoli_Z1214_like Feature: gene Location: 976-1221 bp Feature: gene Location: 1221-1634 bp Feature: domain Description: DUF932 Location: 1224-1599 bp Feature: domain Description: DUF932 Location: 1 224-1 599 bp Feature: gene Location: 1780-3558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041-2836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041 -2836 bp Feature: domain Description: Intron_maturas2 Location: 2962-3187 bp Feature: domain Description: Intron_maturas2 Location: 2962-31 87 bp Feature: domain Description: HNHc Note: nucleases Location: 3382-3532 bp Feature: domain Description: HNHc Note: nucleases Location: 3382-3532 bp Feature: gene Location: 4671-5081 bp Feature: gene Location: 5909-6979 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 5936-6851 bp Feature: domain Description: Pat_hypo_Ecoli_Z1 21 4_like Location: 5936-6851 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Pat_hypo_Ecoli_Z1214_like (cd07209)