myRT

myRT report for GCA_000616725.2_Ec2011C-3072

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Seq: JHMC01000028.1 Escherichia coli O121:H19 str. 2011C-3072 contig28, whole genome shotgun sequence (13724 bp)
Overview 1 RT 1: 5333-11336 bp Neighborhood of RT #1 [5333, 11336] Pat_hypo_Ecoli_Z1214_like RVT-GII Intron_maturas2 HNHc DUF932 Feature: gene Location: 5333-6403 bp Feature: domain Description: Pat_hypo_Ecoli_Z1214_like Location: 5360-6275 bp Feature: domain Description: Pat_hypo_Ecoli_Z1 21 4_like Location: 5360-6275 bp Feature: gene Location: 7231-7641 bp Feature: gene Location: 8754-10532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9015-9810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 5-981 0 bp Feature: domain Description: Intron_maturas2 Location: 9936-10161 bp Feature: domain Description: Intron_maturas2 Location: 9936-1 01 61 bp Feature: domain Description: HNHc Note: nucleases Location: 10356-10506 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0356-1 0506 bp Feature: gene Location: 10678-11091 bp Feature: domain Description: DUF932 Location: 10681-11056 bp Feature: domain Description: DUF932 Location: 1 0681 -1 1 056 bp Feature: gene Location: 11091-11336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), Pat_hypo_Ecoli_Z1214_like (cd07209), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)