myRT

myRT report for GCA_000620045.1_ASM62004v1

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Seq: JHVH01000022.1 Halomonas halodenitrificans DSM 735 Q358DRAFT_scaffold00019.19_C, whole genome shotgun sequence (63761 bp)
Overview 1 RT 1: 52966-58196 bp Neighborhood of RT #1 [52966, 58243] CybB PRK03757 RVT-GII GIIM MATE_like_2 molyb_mobA Feature: gene Location: 52966-53517 bp Feature: domain Description: CybB Location: 52972-53497 bp Feature: domain Description: CybB Location: 52972-53497 bp Feature: gene Location: 53582-54166 bp Feature: domain Description: PRK03757 Location: 53588-54164 bp Feature: domain Description: PRK03757 Location: 53588-541 64 bp Feature: gene Location: 54687-56075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55011-55629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5501 1 -55629 bp Feature: domain Description: GIIM Note: maturase Location: 55680-55896 bp Feature: domain Description: GIIM Note: maturase Location: 55680-55896 bp Feature: gene Location: 56191-57537 bp Feature: domain Description: MATE_like_2 Location: 56236-57502 bp Feature: domain Description: MATE_like_2 Location: 56236-57502 bp Feature: gene Location: 57638-58243 bp Feature: domain Description: molyb_mobA Location: 57662-58196 bp Feature: domain Description: molyb_mobA Location: 57662-581 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CybB (COG3038), PRK03757 (YceI family protein), RVT-GII, GIIM (pfam08388), MATE_like_2 (cd13149), molyb_mobA (TIGR02665)

Seq: JHVH01000034.1 Halomonas halodenitrificans DSM 735 Q358DRAFT_scaffold00031.31_C, whole genome shotgun sequence (17867 bp)
Overview 1 RT 1: 13758-17766 bp Neighborhood of RT #1 [13758, 17864] glmM Tra5 RVT-GII GIIM HTH_32 HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 13758-13997 bp Feature: domain Description: glmM Location: 13761-13992 bp Feature: domain Description: glmM Location: 13761-13992 bp Feature: gene Location: 14052-14621 bp Feature: domain Description: Tra5 Location: 14055-14463 bp Feature: domain Description: Tra5 Location: 14055-14463 bp Feature: gene Location: 14756-16207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14954-15686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14954-15686 bp Feature: domain Description: GIIM Note: maturase Location: 15758-15965 bp Feature: domain Description: GIIM Note: maturase Location: 15758-15965 bp Feature: gene Location: 16924-17358 bp Feature: domain Description: HTH_32 Location: 17002-17224 bp Feature: domain Description: HTH_32 Location: 17002 -172 2 4 bp Feature: gene Location: 17385-17864 bp Feature: domain Description: HTH_Tnp_1 Location: 17424-17526 bp Feature: domain Description: HTH_Tnp_1 Location: 1742 4-1752 6 bp Feature: domain Description: HTH_Tnp_1 Location: 17538-17766 bp Feature: domain Description: HTH_Tnp_1 Location: 17538-17766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glmM (TIGR01455), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527)

Seq: JHVH01000044.1 Halomonas halodenitrificans DSM 735 Q358DRAFT_scaffold00041.41_C, whole genome shotgun sequence (3165 bp)
Overview 1 RT 1: 1-3090 bp Neighborhood of RT #1 [1, 3101] MATE_tuaB_like GT_2_like_d RVT-GII HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 1-1374 bp Feature: domain Description: MATE_tuaB_like Location: 10-1165 bp Feature: domain Description: MATE_tuaB_like Location: 10-1165 bp Feature: gene Location: 1397-2416 bp Feature: domain Description: GT_2_like_d Location: 1514-2147 bp Feature: domain Description: GT_2_like_d Location: 1514-2147 bp Feature: gene Location: 2504-2698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2552-2651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2552-2651 bp Feature: gene Location: 2754-3101 bp Feature: domain Description: HTH_Tnp_1 Location: 2760-2913 bp Feature: domain Description: HTH_Tnp_1 Location: 2760-2913 bp Feature: domain Description: HTH_Tnp_1 Location: 2937-3090 bp Feature: domain Description: HTH_Tnp_1 Location: 293 7-3 090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MATE_tuaB_like (cd13127), GT_2_like_d (cd04196), RVT-GII, HTH_Tnp_1 (pfam01527)