myRT

myRT report for GCA_000620225.1_ASM62022v1

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Seq: JHVQ01000005.1 Variovorax sp. URHB0020 N535DRAFT_scaffold00003.3_C, whole genome shotgun sequence (566384 bp)
Overview 1 RT 1: 485370-490197 bp Neighborhood of RT #1 [485370, 490202] AnmK PRK10504 RVT-GII GIIM PRK13623 Feature: gene Location: 485370-486482 bp Feature: domain Description: AnmK Location: 485382-486480 bp Feature: domain Description: AnmK Location: 485382-486480 bp Feature: gene Location: 486505-487923 bp Feature: domain Description: PRK10504 Location: 486523-487882 bp Feature: domain Description: PRK1 0504 Location: 486523-487882 bp Feature: gene Location: 488031-489401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488367-488979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488367-488979 bp Feature: domain Description: GIIM Note: maturase Location: 489042-489237 bp Feature: domain Description: GIIM Note: maturase Location: 489042-489237 bp Feature: gene Location: 489632-489817 bp Feature: gene Location: 489837-490202 bp Feature: domain Description: PRK13623 Location: 489864-490197 bp Feature: domain Description: PRK1 3623 Location: 489864-4901 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AnmK (pfam03702), PRK10504 (putative transporter; Provisional), RVT-GII, GIIM (pfam08388), PRK13623 (iron-sulfur cluster insertion protein ErpA; Provisional)

Seq: JHVQ01000031.1 Variovorax sp. URHB0020 N535DRAFT_scaffold00029.29_C, whole genome shotgun sequence (39026 bp)
Overview 1 RT 1: 10697-18202 bp Neighborhood of RT #1 [10697, 18202] DDE_Tnp_Tn3 RVT-UG12 RVT-UG7 Feature: gene Location: 10697-11236 bp Feature: gene Location: 11301-12941 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 11706-12864 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 11706-12 864 bp Feature: gene Location: 13248-14927 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 13608-14055 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 13608-14055 bp Feature: gene Location: 15190-15339 bp Feature: gene Location: 15357-17066 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15801-16212 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 15801-162 12 bp Feature: gene Location: 17044-17781 bp Feature: gene Location: 17999-18202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-UG12, RVT-UG7