myRT

myRT report for GCA_000620565.1_ASM62056v1

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Seq: KK211152.1 Paenibacillus sp. URHA0014 genomic scaffold N522DRAFT_scaffold00010.10, whole genome shotgun sequence (253571 bp)
Overview 1 RT 1: 180792-187565 bp Neighborhood of RT #1 [180792, 187606] RVT-UG17 SLATT_5 RVT-UG17 HTH_19 ImmA COG2405 Feature: gene Location: 180792-181121 bp Feature: gene Location: 181266-181697 bp Feature: gene Location: 181976-183319 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 182204-182792 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 82204-1 82792 bp Feature: gene Location: 183322-183909 bp Feature: domain Description: SLATT_5 Location: 183349-183886 bp Feature: domain Description: SLATT_5 Location: 1 83349-1 83886 bp Feature: gene Location: 184448-185800 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 184676-185267 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 84676-1 85267 bp Feature: gene Location: 185907-187076 bp Feature: domain Description: HTH_19 Location: 185943-186129 bp Feature: domain Description: HTH_1 9 Location: 1 85943-1 861 29 bp Feature: domain Description: ImmA Location: 186378-186867 bp Feature: domain Description: ImmA Location: 1 86378-1 86867 bp Feature: gene Location: 187082-187606 bp Feature: domain Description: COG2405 Location: 187097-187565 bp Feature: domain Description: COG2405 Location: 1 87097-1 87565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), HTH_19 (pfam12844), ImmA (COG2856), COG2405 (Predicted nucleic acid-binding protein, contains PIN domain )

Seq: JIAZ01000035.1 Paenibacillus sp. URHA0014 N522DRAFT_scaffold00032.32_C, whole genome shotgun sequence (48870 bp)
Overview 1 RT 1: 30412-33872 bp Neighborhood of RT #1 [30412, 33872] Transposase_20 RVT-GII GIIM APH Feature: gene Location: 30412-30987 bp Feature: domain Description: Transposase_20 Location: 30817-30967 bp Feature: domain Description: Transposase_2 0 Location: 30817-30967 bp Feature: gene Location: 31159-31455 bp Feature: gene Location: 31515-32333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31518-31896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31518-31896 bp Feature: domain Description: GIIM Note: maturase Location: 31974-32214 bp Feature: domain Description: GIIM Note: maturase Location: 31974-32 2 14 bp Feature: gene Location: 32529-33428 bp Feature: domain Description: APH Location: 32691-33252 bp Feature: domain Description: APH Location: 32 691-332 52 bp Feature: gene Location: 33648-33872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_20 (pfam02371), RVT-GII, GIIM (pfam08388), APH (pfam01636)