myRT

myRT report for GCA_000620605.1_ASM62060v1

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Seq: JIAX01000009.1 Ahrensia sp. 13_GOM-1096m N530DRAFT_scaffold00003.3_C, whole genome shotgun sequence (458143 bp)
Overview 1 RT 1: 144219-148814 bp Neighborhood of RT #1 [144219, 148831] AcrR RVT-Retrons COG3448 Feature: gene Location: 144219-144767 bp Feature: domain Description: AcrR Location: 144234-144654 bp Feature: domain Description: AcrR Location: 1 44234-1 44654 bp Feature: gene Location: 145155-145361 bp Feature: gene Location: 145547-147310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 145757-146306 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 45757-1 46306 bp Feature: gene Location: 147458-147601 bp Feature: gene Location: 147665-148831 bp Feature: domain Description: COG3448 Location: 147680-148814 bp Feature: domain Description: COG3448 Location: 1 47680-1 4881 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-Retrons, COG3448 (CBS-domain-containing membrane protein )

Seq: JIAX01000011.1 Ahrensia sp. 13_GOM-1096m N530DRAFT_scaffold00005.5_C, whole genome shotgun sequence (315358 bp)
Overview 1 RT 1: 274634-279693 bp Neighborhood of RT #1 [274634, 279693] RNase_HI_prokaryote_like RVT-G2L4 SSL2 Feature: gene Location: 274634-275242 bp Feature: domain Description: RNase_HI_prokaryote_like Location: 274838-275219 bp Feature: domain Description: RNase_HI_prokaryote_like Location: 2 74838-2 752 19 bp Feature: gene Location: 275309-275590 bp Feature: gene Location: 275569-275724 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 275572-275692 bp Feature: RT Description: RVT-G2 L4 Note: G2 L4 RT Location: 2 75572 -2 75692 bp Feature: gene Location: 275867-279280 bp Feature: domain Description: SSL2 Location: 276158-276887 bp Feature: domain Description: SSL2 Location: 2 76158-2 76887 bp Feature: gene Location: 279439-279693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HI_prokaryote_like (cd09278), RVT-G2L4, SSL2 (COG1061)

Seq: JIAX01000014.1 Ahrensia sp. 13_GOM-1096m N530DRAFT_scaffold00008.8_C, whole genome shotgun sequence (174811 bp)
Overview 1 RT 1: 75235-82157 bp Neighborhood of RT #1 [75235, 82157] COG5510 PRK05298 RVT-UG17 Feature: gene Location: 75235-75384 bp Feature: domain Description: COG5510 Location: 75259-75340 bp Feature: domain Description: COG5510 Location: 75259-753 40 bp Feature: gene Location: 75524-78703 bp Feature: domain Description: PRK05298 Location: 76184-78161 bp Feature: domain Description: PRK05298 Location: 76184-78161 bp Feature: gene Location: 79471-80832 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 79711-80311 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 79711-803 11 bp Feature: gene Location: 81123-81257 bp Feature: gene Location: 81492-82157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5510 (Predicted small secreted protein ), PRK05298 (excinuclease ABC subunit UvrB), RVT-UG17