myRT

myRT report for GCA_000621145.1_ASM62114v1

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Seq: JHZB01000015.1 Desulfobulbus elongatus DSM 2908 Q362DRAFT_scaffold00014.14_C, whole genome shotgun sequence (107555 bp)
Overview 1 RT 1: 37784-43468 bp Neighborhood of RT #1 [37784, 43488] PHA00653 Avd_like RVT-DGRs INT_Rci_Hp1_C PRK14902 Feature: gene Location: 37784-38854 bp Feature: domain Description: PHA00653 Location: 37985-38843 bp Feature: domain Description: PHA00653 Location: 37985-38843 bp Feature: gene Location: 38856-39212 bp Feature: domain Description: Avd_like Location: 38898-39201 bp Feature: domain Description: Avd_like Location: 38898-39201 bp Feature: gene Location: 39521-40570 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39740-40412 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 39740-4041 2 bp Feature: gene Location: 40614-41915 bp Feature: domain Description: INT_Rci_Hp1_C Location: 41346-41847 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 41 346-41 847 bp Feature: gene Location: 42031-43488 bp Feature: domain Description: PRK14902 Location: 42151-43468 bp Feature: domain Description: PRK1 4902 Location: 421 51 -43468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, INT_Rci_Hp1_C (cd00796), PRK14902 (16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB)

Seq: JHZB01000024.1 Desulfobulbus elongatus DSM 2908 Q362DRAFT_scaffold00023.23_C, whole genome shotgun sequence (59688 bp)
Overview 1 RT 1: 110-3839 bp Neighborhood of RT #1 [110, 3931] RVT-GII GIIM DDE_5 DDE_Tnp_2 CxxCxxCC Feature: gene Location: 110-268 bp Feature: gene Location: 416-1771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-142 4 bp Feature: domain Description: GIIM Note: maturase Location: 1505-1703 bp Feature: domain Description: GIIM Note: maturase Location: 1505-1703 bp Feature: gene Location: 1966-3351 bp Feature: domain Description: DDE_5 Location: 2185-2707 bp Feature: domain Description: DDE_5 Location: 2 185-2 707 bp Feature: domain Description: DDE_Tnp_2 Location: 2851-3019 bp Feature: domain Description: DDE_Tnp_2 Location: 2 851-3019 bp Feature: gene Location: 3497-3931 bp Feature: domain Description: CxxCxxCC Location: 3545-3839 bp Feature: domain Description: CxxCxxCC Location: 3545-3839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), DDE_Tnp_2 (pfam04693), CxxCxxCC (pfam03692), RVT-GII, GIIM (pfam08388)

Seq: JHZB01000072.1 Desulfobulbus elongatus DSM 2908 Q362DRAFT_scaffold00071.71_C, whole genome shotgun sequence (3049 bp)
Overview 1 RT 1: 578-2966 bp Neighborhood of RT #1 [578, 3016] RVT-GII Feature: gene Location: 578-742 bp Feature: gene Location: 759-1556 bp Feature: gene Location: 2003-3016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381-2966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 81-2966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII