myRT

myRT report for GCA_000622265.1_CLC_6.5.1_of_E._coli_genome

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Seq: JDFV01000054.1 Escherichia coli E1728 strain 1728 E1728_contig_54, whole genome shotgun sequence (57247 bp)
Overview 1 RT 1: 49351-55814 bp Neighborhood of RT #1 [49351, 56812] mutS1 INT_Rci_Hp1_C INT_P4_C RVT-UG3 RVT-UG8 Feature: gene Location: 49351-51918 bp Ori: EZG30679.1 Feature: domain Description: mutS1 Location: 49387-51907 bp Feature: domain Description: mutS1 Location: 49387-51 907 bp Feature: gene Location: 52078-53538 bp Ori: EZG30680.1 Feature: domain Description: INT_Rci_Hp1_C Location: 52453-52660 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 52453-52660 bp Feature: domain Description: INT_P4_C Location: 52879-53416 bp Feature: domain Description: INT_P4_C Location: 52879-5341 6 bp Feature: gene Location: 53535-54797 bp Ori: EZG30681.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 53817-54312 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5381 7-5431 2 bp Feature: gene Location: 54794-56812 bp Ori: EZG30682.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55364-55814 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 55364-5581 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutS1 (TIGR01070), INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), RVT-UG3, RVT-UG8

Seq: JDFV01000079.1 Escherichia coli E1728 strain 1728 E1728_contig_79, whole genome shotgun sequence (39496 bp)
Overview 1 RT 1: 1-4640 bp Neighborhood of RT #1 [1, 4642] Caudo_TAP RVT-UG17 SLATT_5 prfC Feature: gene Location: 1-360 bp Ori: EZG30027.1 Feature: domain Description: Caudo_TAP Location: 4-349 bp Feature: domain Description: Caudo_TAP Location: 4-349 bp Feature: gene Location: 473-1843 bp Ori: EZG30028.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 701-1307 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 701-1307 bp Feature: gene Location: 1821-2372 bp Ori: EZG30029.1 Feature: domain Description: SLATT_5 Location: 1830-2343 bp Feature: domain Description: SLATT_5 Location: 1830-2 343 bp Feature: gene Location: 3053-4642 bp Ori: EZG30030.1 Gene: prfC Feature: domain Description: prfC Location: 3074-4640 bp Feature: domain Description: prfC Location: 3074-4640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160), prfC (TIGR00503)