myRT

myRT report for GCA_000626835.1_gsaco30v01

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Seq: JHQD01000016.1 (60639 bp)
Overview 1 RT 1: 23573-30367 bp Neighborhood of RT #1 [23573, 30367] AlsD PRK08617 RVT-Retrons Feature: gene Location: 23573-24277 bp Ori: EZI16020.1 Gene: budA_2 Feature: domain Description: AlsD Location: 23576-24275 bp Feature: domain Description: AlsD Location: 23576-24275 bp Feature: gene Location: 24314-25978 bp Ori: EZI16070.1 Gene: alsS Feature: domain Description: PRK08617 Location: 24323-25970 bp Feature: domain Description: PRK0861 7 Location: 24323-25970 bp Feature: gene Location: 27228-28244 bp Ori: EZI16032.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27378-27915 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27378-2791 5 bp Feature: gene Location: 28489-29766 bp Feature: gene Location: 30254-30367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlsD (COG3527), PRK08617 (acetolactate synthase AlsS), RVT-Retrons

Seq: JHQD01000011.1 (27604 bp)
Overview 1 RT 1: 20772-27293 bp Neighborhood of RT #1 [20772, 27319] RVT-AbiK RVT-AbiK PenP MecR1 Transpeptidase Feature: gene Location: 20772-21260 bp Feature: gene Location: 21340-21948 bp Feature: gene Location: 22488-23078 bp Ori: EZI16652.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 22962-23061 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 2 962 -2 3061 bp Feature: gene Location: 23165-24256 bp Ori: EZI16640.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 23168-23348 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 3168-2 3348 bp Feature: gene Location: 24610-25455 bp Ori: EZI16633.1 Feature: domain Description: PenP Location: 24622-25447 bp Feature: domain Description: PenP Location: 2 462 2 -2 5447 bp Feature: gene Location: 25562-27319 bp Ori: EZI16623.1 Gene: blaR Feature: domain Description: MecR1 Location: 25565-26591 bp Feature: domain Description: MecR1 Location: 2 5565-2 6591 bp Feature: domain Description: Transpeptidase Location: 26648-27293 bp Feature: domain Description: Transpeptidase Location: 2 6648-2 72 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiK, PenP (COG2367), MecR1 (COG4219), Transpeptidase (pfam00905)