myRT

myRT report for GCA_000627835.1_ASM62783v1

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Seq: JJME01000090.1 (18240 bp)
Overview 1 RT 1: 362-5155 bp Neighborhood of RT #1 [362, 5157] RVT-GII GIIM PRK09928 Feature: gene Location: 362-475 bp Feature: gene Location: 672-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2871-3128 bp Feature: gene Location: 3160-5157 bp Feature: domain Description: PRK09928 Location: 3175-5155 bp Feature: domain Description: PRK09928 Location: 31 75-51 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09928 (choline transport protein BetT; Provisional), RVT-GII, GIIM (pfam08388)

Seq: JJME01000128.1 (3375 bp)
Overview 1 RT 1: 718-3067 bp Neighborhood of RT #1 [718, 3312] PHA02517 RVT-GII GIIM Feature: gene Location: 718-1197 bp Feature: domain Description: PHA02517 Location: 778-1132 bp Feature: domain Description: PHA02 517 Location: 778-1132 bp Feature: gene Location: 1494-1607 bp Feature: gene Location: 1804-3312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2062-2794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 062 -2 794 bp Feature: domain Description: GIIM Note: maturase Location: 2869-3067 bp Feature: domain Description: GIIM Note: maturase Location: 2 869-3067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JJME01000051.1 (21068 bp)
Overview 1 RT 1: 18411-20760 bp Neighborhood of RT #1 [18411, 21005] PHA02517 RVT-GII GIIM Feature: gene Location: 18411-18890 bp Feature: domain Description: PHA02517 Location: 18471-18825 bp Feature: domain Description: PHA02517 Location: 18471-18825 bp Feature: gene Location: 19187-19300 bp Feature: gene Location: 19497-21005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19755-20487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19755-20487 bp Feature: domain Description: GIIM Note: maturase Location: 20562-20760 bp Feature: domain Description: GIIM Note: maturase Location: 20562-20760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JJME01000113.1 (3484 bp)
Overview 1 RT 1: 1067-3176 bp Neighborhood of RT #1 [1067, 3421] PHA02517 RVT-GII GIIM Feature: gene Location: 1067-1306 bp Feature: domain Description: PHA02517 Location: 1070-1241 bp Feature: domain Description: PHA02517 Location: 1070-124 1 bp Feature: gene Location: 1603-1716 bp Feature: gene Location: 1913-3421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2171-2903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2171-2903 bp Feature: domain Description: GIIM Note: maturase Location: 2978-3176 bp Feature: domain Description: GIIM Note: maturase Location: 2978-3176 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JJME01000067.1 (76066 bp)
Overview 1 RT 1: 49601-53480 bp Neighborhood of RT #1 [49601, 53485] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49601-50056 bp Feature: domain Description: dut Location: 49604-50051 bp Feature: domain Description: dut Location: 49604-5 005 1 bp Feature: gene Location: 50163-50759 bp Feature: domain Description: slmA Location: 50169-50745 bp Feature: domain Description: slmA Location: 5 0169-5 0745 bp Feature: gene Location: 50805-51764 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50940-51489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5 0940-5 1489 bp Feature: gene Location: 52062-52703 bp Feature: domain Description: pyrE Location: 52065-52698 bp Feature: domain Description: pyrE Location: 5 2065 -5 2698 bp Feature: gene Location: 52769-53485 bp Feature: domain Description: rph Location: 52772-53480 bp Feature: domain Description: rph Location: 5 2772-5 3480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: JJME01000048.1 (12102 bp)
Overview 1 RT 1: 9015-11741 bp Neighborhood of RT #1 [9015, 11741] PHA02517 RVT-GII GIIM Feature: gene Location: 9015-9272 bp Feature: gene Location: 9594-9758 bp Feature: domain Description: PHA02517 Location: 9597-9687 bp Feature: domain Description: PHA02517 Location: 9597-96 87 bp Feature: gene Location: 9923-11431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10181-10913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10181-10913 bp Feature: domain Description: GIIM Note: maturase Location: 10988-11186 bp Feature: domain Description: GIIM Note: maturase Location: 10988-11186 bp Feature: gene Location: 11628-11741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JJME01000042.1 (33530 bp)
Overview 1 RT 1: 362-3289 bp Neighborhood of RT #1 [362, 3324] RVT-GII GIIM PHA02517 TagG Feature: gene Location: 362-475 bp Feature: gene Location: 672-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 17 37 -1935 bp Feature: gene Location: 2357-2743 bp Feature: domain Description: PHA02517 Location: 2360-2741 bp Feature: domain Description: PHA02517 Location: 2360-27 41 bp Feature: gene Location: 2746-3324 bp Feature: domain Description: TagG Location: 2767-3289 bp Feature: domain Description: TagG Location: 27 67 -3289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), TagG (COG1682), RVT-GII, GIIM (pfam08388)