myRT

myRT report for GCA_000629045.1_Pseu_aeru_BWH035_V1

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Seq: KK212011.1 (165015 bp)
Overview 1 RT 1: 128629-136813 bp Neighborhood of RT #1 [128629, 136827] PRK10770 LptD RVT-GII YkfC HNH COG3178 Feature: gene Location: 128629-129921 bp Ori: EZN51626.1 Feature: domain Description: PRK10770 Location: 128719-129913 bp Feature: domain Description: PRK1 0770 Location: 1 2871 9-1 2991 3 bp Feature: gene Location: 129902-132694 bp Ori: EZN51627.1 Feature: domain Description: LptD Location: 130097-132680 bp Feature: domain Description: LptD Location: 1 30097-1 32680 bp Feature: gene Location: 132827-134137 bp Ori: EZN51628.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132830-133403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 32830-1 33403 bp Feature: domain Description: YkfC Location: 133616-133766 bp Feature: domain Description: YkfC Location: 1 3361 6-1 33766 bp Feature: domain Description: HNH Note: nucleases Location: 133943-134081 bp Feature: domain Description: HNH Note: nucleases Location: 1 33943-1 34081 bp Feature: gene Location: 135380-135514 bp Feature: gene Location: 135811-136827 bp Ori: EZN51630.1 Feature: domain Description: COG3178 Location: 135814-136813 bp Feature: domain Description: COG31 78 Location: 1 3581 4-1 3681 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), LptD (COG1452), RVT-GII, YkfC (COG3344), HNH (pfam01844), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family )

Seq: KK212046.1 (25611 bp)
Overview 1 RT 1: 1600-11640 bp Neighborhood of RT #1 [1600, 11651] AAA_23 Smc RVT-UG1 RhsA RhsA RhsA RHS_repeat RhsA RhsA Feature: gene Location: 1600-1911 bp Feature: gene Location: 1908-3785 bp Ori: EZN41543.1 Feature: domain Description: AAA_23 Location: 1983-2796 bp Feature: domain Description: AAA_2 3 Location: 1983-2 796 bp Feature: domain Description: Smc Location: 2973-3285 bp Feature: domain Description: Smc Location: 2 973-32 85 bp Feature: gene Location: 3866-7687 bp Ori: EZN41544.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4490-4967 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 4490-4967 bp Feature: gene Location: 8422-11127 bp Ori: EZN41545.1 Feature: domain Description: RhsA Location: 8554-9088 bp Feature: domain Description: RhsA Location: 8554-9088 bp Feature: domain Description: RhsA Location: 9106-9580 bp Feature: domain Description: RhsA Location: 9106-9580 bp Feature: domain Description: RhsA Location: 9589-9895 bp Feature: domain Description: RhsA Location: 9589-9895 bp Feature: domain Description: RHS_repeat Location: 9925-9976 bp Feature: domain Description: RHS_repeat Location: 992 5-9976 bp Feature: domain Description: RhsA Location: 9979-10768 bp Feature: domain Description: RhsA Location: 9979-10768 bp Feature: gene Location: 11142-11651 bp Ori: EZN41546.1 Feature: domain Description: RhsA Location: 11148-11640 bp Feature: domain Description: RhsA Location: 11148-11640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_23 (pfam13476), Smc (COG1196), RVT-UG1, RhsA (COG3209), RHS_repeat (pfam05593)