myRT

myRT report for GCA_000629385.1_Pseu_aeru_BWH060_V1

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Seq: KK213170.1 Pseudomonas aeruginosa BWH060 genomic scaffold adTvY-supercont1.4, whole genome shotgun sequence (805623 bp)
Overview 1 RT 1: 625898-636590 bp Neighborhood of RT #1 [625898, 636592] INT_Rci_Hp1_C RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 625898-626656 bp Feature: gene Location: 626733-627827 bp Feature: domain Description: INT_Rci_Hp1_C Location: 627243-627744 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 627243-627744 bp Feature: gene Location: 628129-629814 bp Feature: RT Description: RVT_N Location: 628186-628426 bp Feature: RT Description: RVT_N Location: 6281 86-628426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628474-629110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 628474-6291 1 0 bp Feature: domain Description: GIIM Note: maturase Location: 629164-629395 bp Feature: domain Description: GIIM Note: maturase Location: 6291 64-629395 bp Feature: domain Description: HNH Note: nucleases Location: 629647-629785 bp Feature: domain Description: HNH Note: nucleases Location: 629647-629785 bp Feature: gene Location: 630895-634632 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 631003-631660 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 631 003-631 660 bp Feature: domain Description: PRK09776 Location: 631873-632344 bp Feature: domain Description: PRK09776 Location: 631 873-632344 bp Feature: domain Description: PAS Location: 632389-632926 bp Feature: domain Description: PAS Location: 632389-632926 bp Feature: domain Description: PRK10060 Location: 632935-634582 bp Feature: domain Description: PRK1 0060 Location: 632935-634582 bp Feature: gene Location: 634739-636592 bp Feature: domain Description: PRK05658 Location: 634751-636590 bp Feature: domain Description: PRK05658 Location: 634751 -636590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Rci_Hp1_C (cd00796), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)