myRT

myRT report for GCA_000632785.1_CloSca1.0

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Seq: JIDX01000073.1 Clostridium scatologenes strain ATCC 25775 NODE_78_length_113414_cov_35.625118, whole genome shotgun sequence (113514 bp)
Overview 1 RT 1: 15584-31418 bp Neighborhood of RT #1 [15584, 31537] hsdR HsdR dnaG RVT-UNC DUF2357 PDDEXK_7 Feature: gene Location: 15584-18856 bp Feature: domain Description: hsdR Location: 15590-16034 bp Feature: domain Description: hsdR Location: 1 5590-1 6034 bp Feature: domain Description: HsdR Location: 16157-18842 bp Feature: domain Description: HsdR Location: 1 61 57-1 8842 bp Feature: gene Location: 19500-21467 bp Feature: gene Location: 21883-29682 bp Feature: domain Description: dnaG Location: 21964-23197 bp Feature: domain Description: dnaG Location: 21 964-231 97 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23938-24454 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 23938-24454 bp Feature: gene Location: 29780-29959 bp Feature: gene Location: 30011-31537 bp Feature: domain Description: DUF2357 Location: 30155-30881 bp Feature: domain Description: DUF2357 Location: 301 55-30881 bp Feature: domain Description: PDDEXK_7 Location: 30953-31418 bp Feature: domain Description: PDDEXK_7 Location: 30953-31 41 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdR (TIGR00348), HsdR (COG4096), dnaG (TIGR01391), RVT-UG1/RVT-GII/RVT-Retrons/RVT-UG25(RVT-UNC), DUF2357 (pfam09823), PDDEXK_7 (pfam04411)

Seq: JIDX01000147.1 Clostridium scatologenes strain ATCC 25775 NODE_214_length_1318_cov_67.278450, whole genome shotgun sequence (1418 bp)
Overview 1 RT 1: 1-1255 bp Neighborhood of RT #1 [1, 1263] RVT-GII GIIM Feature: gene Location: 1-1263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 -970 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1255 bp Feature: domain Description: GIIM Note: maturase Location: 102 1-12 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)