myRT

myRT report for GCA_000633375.1_ASM63337v1

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Seq: AYMS01000118.1 (2468 bp)
Overview 1 RT 1: 3-1816 bp Neighborhood of RT #1 [3, 1908] DDE_Tnp_IS66 RVT-GII GIIM Feature: gene Location: 3-635 bp Feature: domain Description: DDE_Tnp_IS66 Location: 66-633 bp Feature: domain Description: DDE_Tnp_IS66 Location: 66-633 bp Feature: gene Location: 646-1908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850-1507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 850-1 507 bp Feature: domain Description: GIIM Note: maturase Location: 1588-1816 bp Feature: domain Description: GIIM Note: maturase Location: 1 588-1 81 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: AYMS01000029.1 (18392 bp)
Overview 1 RT 1: 15406-18320 bp Neighborhood of RT #1 [15406, 18340] HpaA MFS_MdfA_MDR_like RVT-GII Feature: gene Location: 15406-16245 bp Feature: domain Description: HpaA Location: 15427-16228 bp Feature: domain Description: HpaA Location: 1542 7-162 2 8 bp Feature: gene Location: 16252-17493 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 16348-17473 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 16348-17473 bp Feature: gene Location: 17501-18340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17831-18320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17831-1832 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HpaA (TIGR02297), MFS_MdfA_MDR_like (cd17320), RVT-GII

Seq: AYMS01000031.1 (65974 bp)
Overview 1 RT 1: 32511-36791 bp Neighborhood of RT #1 [32511, 37252] Bac_Flav_CT_K Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J DUF4141 Feature: gene Location: 32511-33134 bp Feature: domain Description: Bac_Flav_CT_K Location: 32529-33132 bp Feature: domain Description: Bac_Flav_CT_K Location: 3 2529-3 3 13 2 bp Feature: gene Location: 33151-33345 bp Feature: domain Description: Bac_Flav_CT_J Location: 33163-33325 bp Feature: domain Description: Bac_Flav_CT_J Location: 3 3 163 -3 3 3 25 bp Feature: gene Location: 33440-35269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33725-34547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 725-3 4547 bp Feature: domain Description: Intron_maturas2 Location: 34616-35009 bp Feature: domain Description: Intron_maturas2 Location: 3 4616-3 5009 bp Feature: domain Description: HNHc Note: nucleases Location: 35087-35243 bp Feature: domain Description: HNHc Note: nucleases Location: 3 5087-3 5243 bp Feature: gene Location: 35783-36616 bp Feature: domain Description: Bac_Flav_CT_J Location: 35795-36596 bp Feature: domain Description: Bac_Flav_CT_J Location: 3 5795-3 6596 bp Feature: gene Location: 36620-37252 bp Feature: domain Description: DUF4141 Location: 36641-36791 bp Feature: domain Description: DUF4141 Location: 3 6641-3 6791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_K (TIGR03781), Bac_Flav_CT_J (TIGR03782), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: AYMS01000042.1 (1174 bp)
Overview 1 RT 1: 86-1013 bp Neighborhood of RT #1 [86, 1171] RVT-GII GIIM Feature: gene Location: 86-1171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110-725 bp Feature: domain Description: GIIM Note: maturase Location: 788-1013 bp Feature: domain Description: GIIM Note: maturase Location: 788-1013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AYMS01000032.1 (52481 bp)
Overview 1 RT 1: 29881-33337 bp Neighborhood of RT #1 [29881, 33337] RVT-GII GIIM Feature: gene Location: 29881-30279 bp Feature: gene Location: 30534-30746 bp Feature: gene Location: 30920-32323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31262-31880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31262-31880 bp Feature: domain Description: GIIM Note: maturase Location: 31940-32165 bp Feature: domain Description: GIIM Note: maturase Location: 31940-32165 bp Feature: gene Location: 32728-32994 bp Feature: gene Location: 33026-33337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)