myRT

myRT report for GCA_000633935.1_ASM63393v1

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Seq: KK214996.1 Ectothiorhodospira haloalkaliphila ATCC 51935 genomic scaffold EcthaDRAFT_EHB.2, whole genome shotgun sequence (860745 bp)
Overview 1 RT 1: 75654-79571 bp 2 RT 2: 84578-90698 bp 3 RT 3: 93886-96188 bp Neighborhood of RT #1 [75654, 79762] conj_conj_conj_TIGR03747 RVT-GII GIIM Neighborhood of RT #2 [84578, 90698] RVT-GII GIIM SIR2-like Neighborhood of RT #3 [93886, 96188] Y2_Tnp RVT-GII Y2_Tnp Feature: gene Location: 75654-76394 bp Feature: domain Description: conj_conj_conj_TIGR03747 Location: 75702-76392 bp Feature: domain Description: conj_conj_conj_TIGR03747 Location: 75702-76392 bp Feature: gene Location: 78128-79153 bp Feature: gene Location: 78407-79762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78710-79325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7871 0-79325 bp Feature: domain Description: GIIM Note: maturase Location: 79367-79571 bp Feature: domain Description: GIIM Note: maturase Location: 79367-79571 bp Feature: gene Location: 84578-84820 bp Feature: gene Location: 84974-86173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85121-85736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 851 21 -85736 bp Feature: domain Description: GIIM Note: maturase Location: 85778-85982 bp Feature: domain Description: GIIM Note: maturase Location: 85778-85982 bp Feature: gene Location: 86307-90137 bp Feature: domain Description: SIR2-like Location: 86370-87018 bp Feature: domain Description: SIR2-like Location: 86370-8701 8 bp Feature: gene Location: 90546-90698 bp Feature: gene Location: 93886-94095 bp Feature: gene Location: 94865-95275 bp Feature: domain Description: Y2_Tnp Location: 94871-95096 bp Feature: domain Description: Y2_Tnp Location: 94871 -95096 bp Feature: gene Location: 95306-96034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95507-95672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95507-95672 bp Feature: domain Description: Y2_Tnp Location: 95759-96032 bp Feature: domain Description: Y2_Tnp Location: 95759-96032 bp Feature: gene Location: 96042-96188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT conj_conj_conj_TIGR03747, RVT-GII, GIIM (pfam08388), SIR2-like (cd01406), Y2_Tnp (pfam04986)

Seq: KK214997.1 Ectothiorhodospira haloalkaliphila ATCC 51935 genomic scaffold EcthaDRAFT_EHB.3, whole genome shotgun sequence (386950 bp)
Overview 1 RT 1: 376901-384368 bp Neighborhood of RT #1 [376901, 384379] DUF1566 RVT-DGRs Avd_like fn3 DUF1566 Feature: gene Location: 376901-377098 bp Feature: gene Location: 377392-377925 bp Feature: domain Description: DUF1566 Location: 377557-377914 bp Feature: domain Description: DUF1566 Location: 377557-377914 bp Feature: gene Location: 377930-379735 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 378371-379139 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 378371-379139 bp Feature: gene Location: 379769-380137 bp Feature: domain Description: Avd_like Location: 379793-380105 bp Feature: domain Description: Avd_like Location: 379793-380105 bp Feature: gene Location: 380165-384379 bp Feature: domain Description: fn3 Location: 380795-381014 bp Feature: domain Description: fn3 Location: 380795-381014 bp Feature: domain Description: DUF1566 Location: 383936-384368 bp Feature: domain Description: DUF1566 Location: 383936-384368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), fn3 (pfam00041)